RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 KCTD17Q8N5Z5 321 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 MAFAQ8NHW3 353 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-215ENST00000584944 MYLIPQ8WY64 445 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 PLIN2Q99541 437 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 AKT3Q9Y243 479 aa15.45■□□□□ 0.06
TRAF4-215ENST00000584944 SCN10AQ9Y5Y9 1956 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-215ENST00000584944 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-215ENST00000584944 CD4P01730 458 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 SPATA31C1P0DKV0 1188 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 ATP4AP20648 1035 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 DDIT3P35638 169 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 SPECC1Q5M775 1068 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 EFCAB12Q6NXP0 572 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 ANO5Q75V66 913 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 C16orf59Q7L2K0 433 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 LEO1Q8WVC0 666 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-215ENST00000584944 SYMPKQ92797 1274 aaKnown RBP15.44■□□□□ 0.06
TRAF4-215ENST00000584944 CLIC6Q96NY7 704 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.44■□□□□ 0.064e-8■■□□□ 14.5
TRAF4-215ENST00000584944 SH2D3AQ9BRG2 576 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 PCDHA2Q9Y5H9 948 aa15.44■□□□□ 0.06
TRAF4-215ENST00000584944 MORC2Q9Y6X9 1032 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-215ENST00000584944 TMEM150BA6NC51 233 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 GAS2O43903 313 aaKnown RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 CAND2O75155 1236 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 KRT18P05783 430 aaKnown RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 CTSHP09668 335 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 STAT6P42226 847 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 NPEPPSP55786 919 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 TMEM240Q5SV17 173 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 RRAGBQ5VZM2 374 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 CCDC73Q6ZRK6 1079 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 ZNF579Q8NAF0 562 aaKnown RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 DNAJB3Q8WWF6 145 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 TCP11Q8WWU5 503 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 PYM1Q9BRP8 204 aaKnown RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 BHMT2Q9H2M3 363 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 BMP2KQ9NSY1 1161 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 WRAP73Q9P2S5 460 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 DBR1Q9UK59 544 aaKnown RBP15.43■□□□□ 0.06
TRAF4-215ENST00000584944 RCOR1Q9UKL0 485 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 GINS2Q9Y248 185 aa15.43■□□□□ 0.06
TRAF4-215ENST00000584944 MYH9P35579 1960 aaKnown RBP15.42■□□□□ 0.06
TRAF4-215ENST00000584944 SMIM35A0A1B0GVV1 85 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 MBLAC1A4D2B0 266 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-215ENST00000584944 RSPH10B2B2RC85 870 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 USO1O60763 962 aaKnown RBP15.42■□□□□ 0.06
TRAF4-215ENST00000584944 DGAT1O75907 488 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 PARNO95453 639 aaKnown RBP15.42■□□□□ 0.06
TRAF4-215ENST00000584944 C22orf31O95567 290 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 RSPH10BP0C881 870 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 SELPP16109 830 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 DNAJB2P25686 324 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 CYP2C18P33260 490 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 CDC42EP1Q00587 391 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 PPIGQ13427 754 aaKnown RBP eCLIP15.42■□□□□ 0.063e-15■■□□□ 12.6
TRAF4-215ENST00000584944 EMC2Q15006 297 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 KARSQ15046 597 aaKnown RBP15.42■□□□□ 0.06
TRAF4-215ENST00000584944 RASIP1Q5U651 963 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 NME8Q8N427 588 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 MCPH1Q8NEM0 835 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 EPSTI1Q96J88 318 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 MTRQ99707 1265 aa15.42■□□□□ 0.06
TRAF4-215ENST00000584944 NOC4LQ9BVI4 516 aaKnown RBP15.42■□□□□ 0.06
TRAF4-215ENST00000584944 MYO9BQ13459 2157 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 A0A087WWV3 80 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 ZBTB39O15060 712 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 MAFO75444 373 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-215ENST00000584944 EYA4O95677 639 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 CKBP12277 381 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 FOSL2P15408 326 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 CSF2RAP15509 400 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 PLCG1P19174 1290 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 HOXC8P31273 242 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 RARRES1P49788 294 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 CLCN3P51790 818 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 CCL23P55773 120 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 GRIN1Q05586 938 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 DHX8Q14562 1220 aaKnown RBP15.41■□□□□ 0.06
TRAF4-215ENST00000584944 GRIN2CQ14957 1233 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 MARCH8Q5T0T0 291 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 FAM102BQ5T8I3 360 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 PADI6Q6TGC4 694 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 RUFY4Q6ZNE9 571 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 LRRC8DQ7L1W4 858 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 LRRC71Q8N4P6 559 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 PDILTQ8N807 584 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 NLRP7Q8WX94 980 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 PSPC1Q8WXF1 523 aaKnown RBP15.41■□□□□ 0.06
TRAF4-215ENST00000584944 CCDC34Q96HJ3 373 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 PANK2Q9BZ23 570 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 CCSER1Q9C0I3 900 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 SUCLA2Q9P2R7 463 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-215ENST00000584944 PCDHA7Q9UN72 937 aa15.41■□□□□ 0.06
TRAF4-215ENST00000584944 KAT6AQ92794 2004 aa15.4■□□□□ 0.06
TRAF4-215ENST00000584944 SPTBN5Q9NRC6 3674 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms