RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 UBE2TQ9NPD8 197 aaPredicted RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 CPA4Q9UI42 421 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 MRPL42Q9Y6G3 142 aaKnown RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 KDM3AQ9Y4C1 1321 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 IGLV3-22A0A075B6J6 115 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 SPOPLQ6IQ16 392 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 MTERF4Q7Z6M4 381 aaKnown RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 SLC38A10Q9HBR0 1119 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 MYO7AQ13402 2215 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 CELF2O95319 508 aaKnown RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 KIF11P52732 1056 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 MTM1Q13496 603 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 MAN2A1Q16706 1144 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 HAUS6Q7Z4H7 955 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 DHX37Q8IY37 1157 aaKnown RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 SLC30A5Q8TAD4 765 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 FAM118BQ9BPY3 351 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 HAUS4Q9H6D7 363 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 KMT5AQ9NQR1 393 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 VAV3Q9UKW4 847 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 DPP9Q86TI2 863 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 TMEM139Q8IV31 216 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 NMRK2Q9NPI5 230 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 PXMP2Q9NR77 195 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 CCDC88AQ3V6T2 1871 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 KRT13P13646 458 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 SFMBT2Q5VUG0 894 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 WDR59Q6PJI9 974 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 RHPN2Q8IUC4 686 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 NOA1Q8NC60 698 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 UHMK1Q8TAS1 419 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 RABGGTAQ92696 567 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 PRIMPOLQ96LW4 560 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 LARSQ9P2J5 1176 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 AJAP1Q9UKB5 411 aaPredicted RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 CAPN6Q9Y6Q1 641 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 A0A1B0GUL6 1792 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 SBF2Q86WG5 1849 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 ZNF286BP0CG31 522 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 CLCN3P51790 818 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 PRKCEQ02156 737 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 KCTD2Q14681 263 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 SESTD1Q86VW0 696 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 GUF1Q8N442 669 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 BTBD6Q96KE9 485 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 FAM20AQ96MK3 541 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 RANBP17Q9H2T7 1088 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 ARHGAP20Q9P2F6 1191 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 LIMA1Q9UHB6 759 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 SPIRE1Q08AE8 756 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 ZNF211Q13398 564 aaPredicted RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 CBWD6Q4V339 395 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 CBWD3Q5JTY5 395 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 CBWD5Q5RIA9 395 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 SCARA3Q6AZY7 606 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 TMTC1Q8IUR5 882 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 NSUN6Q8TEA1 469 aaKnown RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 CCDC102AQ96A19 550 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 ASCC2Q9H1I8 757 aaPredicted RBP11.24□□□□□ -0.61
RFFL-212ENST00000584655 ACAD9Q9H845 621 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
RFFL-212ENST00000584655 A0A087X0T9 212 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 PSMD10O75832 226 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 FAM228BP0C875 321 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
RFFL-212ENST00000584655 ASIC2Q16515 512 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 HSDL1Q3SXM5 330 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
RFFL-212ENST00000584655 AP1M1Q9BXS5 423 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 A0A0C4DFX4 3053 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 FZD9O00144 591 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 ZNF862O60290 1169 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 EYA4O95677 639 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 ACTR2P61160 394 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 ZBTB41Q5SVQ8 909 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 CENPPQ6IPU0 288 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 CCDC50Q8IVM0 306 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 SYT2Q8N9I0 419 aaPredicted RBP11.23□□□□□ -0.61
RFFL-212ENST00000584655 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 JPH1Q9HDC5 661 aaPredicted RBP11.23□□□□□ -0.61
RFFL-212ENST00000584655 NXF1Q9UBU9 619 aaKnown RBP11.23□□□□□ -0.61
RFFL-212ENST00000584655 USTQ9Y2C2 406 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 CYP2B6P20813 491 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 IREB2P48200 963 aaKnown RBP11.23□□□□□ -0.61
RFFL-212ENST00000584655 VPS41P49754 854 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
RFFL-212ENST00000584655 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms