RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 HSPA9P38646 679 aaKnown RBP13.95□□□□□ -0.18
RNF43-208ENST00000584437 KIF19Q2TAC6 998 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 LRIG3Q6UXM1 1119 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 CSADQ9Y600 493 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 PFASO15067 1338 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 ATP7BP35670 1465 aa13.95□□□□□ -0.18
RNF43-208ENST00000584437 PAMP19021 973 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 MORF4L2Q15014 288 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 RPS6KC1Q96S38 1066 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 DDX47Q9H0S4 455 aaKnown RBP13.94□□□□□ -0.18
RNF43-208ENST00000584437 FBXL5Q9UKA1 691 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 YEATS2Q9ULM3 1422 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 INO80B-WBP1J3KQ70 363 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 EIF3HO15372 352 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■□□□ 12.4
RNF43-208ENST00000584437 RARS2Q5T160 578 aaKnown RBP13.94□□□□□ -0.18
RNF43-208ENST00000584437 SCG3Q8WXD2 468 aaKnown RBP13.94□□□□□ -0.18
RNF43-208ENST00000584437 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
RNF43-208ENST00000584437 WNT8AQ9H1J5 351 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 LRRC4Q9HBW1 653 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 CYP26B1Q9NR63 512 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 NXF1Q9UBU9 619 aaKnown RBP13.94□□□□□ -0.18
RNF43-208ENST00000584437 ESYT3A0FGR9 886 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 TRIM49BA6NDI0 452 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 LDHAP00338 332 aaKnown RBP13.94□□□□□ -0.18
RNF43-208ENST00000584437 AGTP01019 485 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 BMP3P12645 472 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 RFX1P22670 979 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 SERPINB13Q9UIV8 391 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 SCNN1DP51172 638 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 COPS2P61201 443 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 SNF8Q96H20 258 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 SLC4A7Q9Y6M7 1214 aa13.94□□□□□ -0.18
RNF43-208ENST00000584437 RNF103-CHMP3A0A140T963 221 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 RANBP1P43487 201 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 PAPOLAP51003 745 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 NEK2P51955 445 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 GRM1Q13255 1194 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 TMEM259Q4ZIN3 620 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 TMED8Q6PL24 325 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 TMEM35BQ8NCS4 154 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 DCTN4Q9UJW0 460 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 TYW5A2RUC4 315 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 STXBP3O00186 592 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 CALB1P05937 261 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 EPHB1P54762 984 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 KCNH2Q12809 1159 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 EPC1Q9H2F5 836 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 BHMT2Q9H2M3 363 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 HDAC6Q9UBN7 1215 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 ZFXP17010 805 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 IL6STP40189 918 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 IGBP1P78318 339 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 CCDC92Q53HC0 331 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 TEX9Q8N6V9 391 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ATP11CQ8NB49 1132 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 BRIP1Q9BX63 1249 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 KIAA1586Q9HCI6 787 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 NR3C1P04150 777 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 GUCY1A3Q02108 690 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 YWHAHQ04917 246 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 STAT4Q14765 748 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ARL13BQ3SXY8 428 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 AGGF1Q8N302 714 aaeCLIP13.93□□□□□ -0.18
RNF43-208ENST00000584437 WDR24Q96S15 920 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 GCOM2Q9BZD3 368 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 CPSF3Q9UKF6 684 aaKnown RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 ELF1P32519 619 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 NBPF20Q3BBV1 942 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 FAM193BQ96PV7 902 aaPredicted RBP13.93□□□□□ -0.18
RNF43-208ENST00000584437 PAGR1Q9BTK6 254 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 WWP1Q9H0M0 922 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ZWILCHQ9H900 591 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 SNX12Q9UMY4 172 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ZDHHC9Q9Y397 364 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 ADGBQ8N7X0 1667 aa13.93□□□□□ -0.18
RNF43-208ENST00000584437 LPXNO60711 386 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 E2F6O75461 281 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 CD58P19256 250 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 KCNA4P22459 653 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 ARMCX2Q7L311 632 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 METTL23Q86XA0 190 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 KIAA0825Q8IV33 1275 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 CXorf56Q9H5V9 222 aa13.92□□□□□ -0.18
RNF43-208ENST00000584437 TEX33O43247 280 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms