RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 TPH2Q8IWU9 490 aa27.87■■■□□ 2.05
TTC39C-209ENST00000584250 LINC01599Q8WXQ3 324 aa27.87■■■□□ 2.05
TTC39C-209ENST00000584250 MYO9BQ13459 2157 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 LCHNA4D1U4 455 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 K7ELQ4 463 aaPredicted RBP27.86■■■□□ 2.05
TTC39C-209ENST00000584250 RPLP2P05387 115 aaKnown RBP27.86■■■□□ 2.05
TTC39C-209ENST00000584250 TECP42680 631 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 C4orf19Q8IY42 314 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 MYOCDQ8IZQ8 938 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 OSMRQ99650 979 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 PADI3Q9ULW8 664 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 AKT3Q9Y243 479 aa27.86■■■□□ 2.05
TTC39C-209ENST00000584250 NOC2LQ9Y3T9 749 aaKnown RBP27.86■■■□□ 2.05
TTC39C-209ENST00000584250 IGKV6-21A0A0C4DH24 114 aa27.85■■■□□ 2.05
TTC39C-209ENST00000584250 CA3P07451 260 aa27.85■■■□□ 2.05
TTC39C-209ENST00000584250 NLRP11P59045 1033 aaKnown RBP27.85■■■□□ 2.05
TTC39C-209ENST00000584250 RTN4RL1Q86UN2 441 aaPredicted RBP27.85■■■□□ 2.05
TTC39C-209ENST00000584250 ADAMTS10Q9H324 1103 aa27.85■■■□□ 2.05
TTC39C-209ENST00000584250 CYP26B1Q9NR63 512 aa27.85■■■□□ 2.05
TTC39C-209ENST00000584250 BMP2KQ9NSY1 1161 aaPredicted RBP27.85■■■□□ 2.05
TTC39C-209ENST00000584250 ARID2Q68CP9 1835 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 EFCAB14O75071 495 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 SPATA31C1P0DKV0 1188 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 YWHABP31946 246 aaKnown RBP27.84■■■□□ 2.05
TTC39C-209ENST00000584250 PTGDRQ13258 359 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 ORC2Q13416 577 aaPredicted RBP27.84■■■□□ 2.05
TTC39C-209ENST00000584250 APBB2Q92870 758 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 CDX2Q99626 313 aaPredicted RBP27.84■■■□□ 2.05
TTC39C-209ENST00000584250 TMX1Q9H3N1 280 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 ZSWIM4Q9H7M6 989 aa27.84■■■□□ 2.05
TTC39C-209ENST00000584250 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.84■■■□□ 2.05
TTC39C-209ENST00000584250 TMEM265A0A087WTH1 108 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 MAFO75444 373 aaPredicted RBP27.83■■■□□ 2.05
TTC39C-209ENST00000584250 MED24O75448 989 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 GJB5O95377 273 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 IL17AQ16552 155 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 MYLIPQ8WY64 445 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 CEP170P1Q96L14 293 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 MAP7D2Q96T17 732 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 SQORQ9Y6N5 450 aa27.83■■■□□ 2.05
TTC39C-209ENST00000584250 ENPP3O14638 875 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 TLL1O43897 1013 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 UPP2O95045 317 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 FERMT3Q86UX7 667 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 SNX21Q969T3 373 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 ZBED2Q9BTP6 218 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 SLC28A3Q9HAS3 691 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 ERVK-5Q9HDB9 667 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 CDH23Q9H251 3354 aa27.82■■■□□ 2.04
TTC39C-209ENST00000584250 VPS37CA5D8V6 355 aaPredicted RBP27.81■■■□□ 2.04
TTC39C-209ENST00000584250 MGEA5O60502 916 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 DKC1O60832 514 aaKnown RBP eCLIP27.81■■■□□ 2.04
TTC39C-209ENST00000584250 AMHP03971 560 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 TMOD1P28289 359 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 GPC3P51654 580 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 CRYBB1P53674 252 aaPredicted RBP27.81■■■□□ 2.04
TTC39C-209ENST00000584250 NFX1Q12986 1120 aaKnown RBP27.81■■■□□ 2.04
TTC39C-209ENST00000584250 PAK2Q13177 524 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 XKR9Q5GH70 373 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 PPP2R2DQ66LE6 453 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 FAM228AQ86W67 206 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 CATSPER3Q86XQ3 398 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 PIGOQ8TEQ8 1089 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 CERS4Q9HA82 394 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 CHD7Q9P2D1 2997 aa27.81■■■□□ 2.04
TTC39C-209ENST00000584250 CSDE1O75534 798 aaKnown RBP27.8■■■□□ 2.04
TTC39C-209ENST00000584250 RPS6KA5O75582 802 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 LYPLA2O95372 231 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 TAP1Q03518 808 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 KSR1Q8IVT5 923 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 USP38Q8NB14 1042 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 TOP1MTQ969P6 601 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 PRDM12Q9H4Q4 367 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 DHX33Q9H6R0 707 aaKnown RBP27.8■■■□□ 2.04
TTC39C-209ENST00000584250 ST3GAL5Q9UNP4 418 aa27.8■■■□□ 2.04
TTC39C-209ENST00000584250 TTC3P53804 2025 aa27.79■■■□□ 2.04
TTC39C-209ENST00000584250 SYT1P21579 422 aa27.79■■■□□ 2.04
TTC39C-209ENST00000584250 RILPL1Q5EBL4 403 aa27.79■■■□□ 2.04
TTC39C-209ENST00000584250 NEK9Q8TD19 979 aa27.79■■■□□ 2.04
TTC39C-209ENST00000584250 TMEM143Q96AN5 459 aa27.79■■■□□ 2.04
TTC39C-209ENST00000584250 INTS4Q96HW7 963 aaKnown RBP27.79■■■□□ 2.04
TTC39C-209ENST00000584250 XPNPEP1Q9NQW7 623 aa27.79■■■□□ 2.04
TTC39C-209ENST00000584250 SUCLA2Q9P2R7 463 aaPredicted RBP27.79■■■□□ 2.04
TTC39C-209ENST00000584250 PP2D1A8MPX8 630 aa27.78■■■□□ 2.04
TTC39C-209ENST00000584250 FGFR4P22455 802 aa27.78■■■□□ 2.04
TTC39C-209ENST00000584250 FXR2P51116 673 aaKnown RBP eCLIP27.78■■■□□ 2.04
TTC39C-209ENST00000584250 ECM1Q16610 540 aa27.78■■■□□ 2.04
TTC39C-209ENST00000584250 RAD9AQ99638 391 aa27.78■■■□□ 2.04
TTC39C-209ENST00000584250 EPOPA6NHQ4 379 aa27.77■■■□□ 2.04
TTC39C-209ENST00000584250 RFXAPO00287 272 aa27.77■■■□□ 2.04
TTC39C-209ENST00000584250 POLGP54098 1239 aaPredicted RBP27.77■■■□□ 2.04
TTC39C-209ENST00000584250 HTRA4P83105 476 aaPredicted RBP27.77■■■□□ 2.04
TTC39C-209ENST00000584250 POTEGQ6S5H5 508 aa27.77■■■□□ 2.04
TTC39C-209ENST00000584250 OTUD6AQ7L8S5 288 aa27.77■■■□□ 2.04
TTC39C-209ENST00000584250 A0A087WZ62 844 aa27.76■■■□□ 2.03
TTC39C-209ENST00000584250 CDC25AP30304 524 aa27.76■■■□□ 2.03
TTC39C-209ENST00000584250 EMC2Q15006 297 aa27.76■■■□□ 2.03
TTC39C-209ENST00000584250 RHPN2Q8IUC4 686 aa27.76■■■□□ 2.03
TTC39C-209ENST00000584250 FDXACB1Q9BRP7 624 aaPredicted RBP27.76■■■□□ 2.03
TTC39C-209ENST00000584250 POLR3CQ9BUI4 534 aaPredicted RBP27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms