RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 MMEP08473 750 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 ZNF20P17024 532 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 PTGS1P23219 599 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 KPNA1P52294 538 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 KIF11P52732 1056 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 AMPD3Q01432 767 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 RNF219Q5W0B1 726 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 Q6ZUG5 572 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 RALYLQ86SE5 291 aaKnown RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 CIR1Q86X95 450 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 NME9Q86XW9 330 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 TTC9BQ8N6N2 239 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 KIAA1958Q8N8K9 716 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 FOXRED1Q96CU9 486 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 ELF4Q99607 663 aaPredicted RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 KCND1Q9NSA2 647 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 GALNT8Q9NY28 637 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 APOBEC2Q9Y235 224 aaKnown RBP5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 ATP8A1Q9Y2Q0 1164 aa5.53□□□□□ -1.52
PPP4R1-227ENST00000583988 GPR42O15529 346 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 ULK1O75385 1050 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 FKBP9O95302 570 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 SLC9A1P19634 815 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 POU3F3P20264 500 aaPredicted RBP5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 EPHB4P54760 987 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 ICAM4Q14773 271 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 DPP8Q6V1X1 898 aaPredicted RBP5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 FKBP9P1Q75LS8 142 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 C11orf74Q86VG3 221 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 CHTF18Q8WVB6 975 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 C16orf92Q96LL3 132 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 PCIF1Q9H4Z3 704 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 UCKL1Q9NWZ5 548 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 MYRFQ9Y2G1 1151 aa5.52□□□□□ -1.53
PPP4R1-227ENST00000583988 PRAMEF22A3QJZ6 481 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 ALG1L2C9J202 215 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 MPIG6BO95866 241 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 PTX3P26022 381 aaPredicted RBP5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 IGBP1P78318 339 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 PHC1P78364 1004 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 ADCY1Q08828 1119 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 LRRC32Q14392 662 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 SLFN13Q68D06 897 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 ZNF585AQ6P3V2 769 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 CXXC5Q7LFL8 322 aaKnown RBP5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 STRA8Q7Z7C7 330 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 IFNL2Q8IZJ0 200 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 UBR7Q8N806 425 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 DVL3Q92997 716 aaPredicted RBP5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 E2F7Q96AV8 911 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 BTBD2Q9BX70 525 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 AMNQ9BXJ7 453 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 DEF6Q9H4E7 631 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 THG1LQ9NWX6 298 aaKnown RBP5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 H2AFY2Q9P0M6 372 aaPredicted RBP5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 PTPN22Q9Y2R2 807 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 PHLDB1Q86UU1 1377 aa5.51□□□□□ -1.53
PPP4R1-227ENST00000583988 hCG_2014768A0A024R1R8 64 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 TGM5O43548 720 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 ZNF888P0CJ79 500 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 MC4RP32245 332 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 CSF2RBP32927 897 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 ADCYAP1R1P41586 468 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 ECE1P42892 770 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 ANAPC15P60006 121 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 IL2P60568 153 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 SMAD3P84022 425 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 EPHA7Q15375 998 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 STILQ15468 1287 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 NECAB2Q7Z6G3 386 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 RTN4RL1Q86UN2 441 aaPredicted RBP5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 HIPK4Q8NE63 616 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 WDR66Q8TBY9 1149 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 C1QTNF3Q9BXJ4 246 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 SPTLC3Q9NUV7 552 aa5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 TYW1Q9NV66 732 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 USP36Q9P275 1121 aaKnown RBP5.5□□□□□ -1.53
PPP4R1-227ENST00000583988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 GPR39O43194 453 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 CNOT4O95628 575 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 LSP1P33241 339 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 STRN3Q13033 797 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 WDR72Q3MJ13 1102 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 DDX42Q86XP3 938 aaKnown RBP eCLIP5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 SPATS2Q86XZ4 545 aaKnown RBP5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 PALM2Q8IXS6 379 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 ANKRD13AQ8IZ07 590 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 ATL2Q8NHH9 583 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 GPATCH3Q96I76 525 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 AJUBAQ96IF1 538 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 GPR101Q96P66 508 aaPredicted RBP5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 GNRHR2Q96P88 292 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 LRRC37BQ96QE4 947 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 MEGF9Q9H1U4 602 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 TMPRSS5Q9H3S3 457 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 EMC7Q9NPA0 242 aa5.49□□□□□ -1.53
PPP4R1-227ENST00000583988 TOMM22Q9NS69 142 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms