RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NID2Q14112 1375 aa17.74■□□□□ 0.43
SKA2-209ENST00000583976 MYH9P35579 1960 aaKnown RBP17.73■□□□□ 0.43
SKA2-209ENST00000583976 IPO5O00410 1097 aaKnown RBP17.73■□□□□ 0.43
SKA2-209ENST00000583976 HBP1O60381 514 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 PFKFB2O60825 505 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 RPS6KA5O75582 802 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 VTNP04004 478 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 STAG3L1P0CL83 205 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 NRIP1P48552 1158 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 SLC26A2P50443 739 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 NTRK3Q16288 839 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 FAM160B1Q5W0V3 765 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 SWSAP1Q6NVH7 229 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 NIPA1Q7RTP0 329 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 RBM23Q86U06 439 aaKnown RBP17.73■□□□□ 0.43
SKA2-209ENST00000583976 MSLNLQ96KJ4 702 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 ADAM2Q99965 735 aa17.73■□□□□ 0.43
SKA2-209ENST00000583976 TECTAO75443 2155 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 TBKBP1A7MCY6 615 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 NCK2O43639 380 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 ST18O60284 1047 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 FGFR1P11362 822 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 CLCN3P51790 818 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 ADAM15Q13444 863 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 PKN1Q16512 942 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 CSPP1Q1MSJ5 1256 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 FAM102BQ5T8I3 360 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 MIS18BP1Q6P0N0 1132 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 VN1R2Q8NFZ6 395 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 ZNF577Q9BSK1 485 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 ST3GAL5Q9UNP4 418 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 LIMCH1Q9UPQ0 1083 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 ARIH1Q9Y4X5 557 aaPredicted RBP17.72■□□□□ 0.43
SKA2-209ENST00000583976 PIEZO1Q92508 2521 aa17.72■□□□□ 0.43
SKA2-209ENST00000583976 IFNAR1P17181 557 aa17.71■□□□□ 0.43
SKA2-209ENST00000583976 AKAP17AQ02040 695 aaKnown RBP17.71■□□□□ 0.43
SKA2-209ENST00000583976 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.43
SKA2-209ENST00000583976 CPLX2Q6PUV4 134 aaKnown RBP17.71■□□□□ 0.43
SKA2-209ENST00000583976 HFE2Q6ZVN8 426 aa17.71■□□□□ 0.43
SKA2-209ENST00000583976 CKAP2LQ8IYA6 745 aa17.71■□□□□ 0.43
SKA2-209ENST00000583976 REXO1Q8N1G1 1221 aaKnown RBP17.71■□□□□ 0.43
SKA2-209ENST00000583976 NME8Q8N427 588 aa17.71■□□□□ 0.43
SKA2-209ENST00000583976 SMRP1Q8NCR6 262 aa17.71■□□□□ 0.43
SKA2-209ENST00000583976 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
SKA2-209ENST00000583976 LENG9Q96B70 501 aa17.71■□□□□ 0.43
SKA2-209ENST00000583976 ZNF668Q96K58 619 aaPredicted RBP17.71■□□□□ 0.43
SKA2-209ENST00000583976 ESYT2A0FGR8 921 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 DENND3A2RUS2 1198 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 C9IYK1 514 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 PER2O15055 1255 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 PRPF3O43395 683 aaKnown RBP17.7■□□□□ 0.42
SKA2-209ENST00000583976 CD2BP2O95400 341 aaKnown RBP17.7■□□□□ 0.42
SKA2-209ENST00000583976 CYP3A4P08684 503 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 SETQ01105 290 aaPredicted RBP17.7■□□□□ 0.42
SKA2-209ENST00000583976 PRR16Q569H4 304 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 ZNF484Q5JVG2 852 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
SKA2-209ENST00000583976 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 TEX2Q8IWB9 1127 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 LRRC71Q8N4P6 559 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 METTL13Q8N6R0 699 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 EFHBQ8N7U6 833 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 ZMYND12Q9H0C1 365 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 RGS18Q9NS28 235 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 GABBR1Q9UBS5 961 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 PCDHB7Q9Y5E2 793 aa17.7■□□□□ 0.42
SKA2-209ENST00000583976 GPR32O75388 356 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 PBX3P40426 434 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 UGCGQ16739 394 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 COLGALT1Q8NBJ5 622 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 GTF3C6Q969F1 213 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 GJA10Q969M2 543 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 POP1Q99575 1024 aaKnown RBP17.69■□□□□ 0.42
SKA2-209ENST00000583976 RNF26Q9BY78 433 aaPredicted RBP17.69■□□□□ 0.42
SKA2-209ENST00000583976 GLT8D2Q9H1C3 349 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 RNF19AQ9NV58 838 aa17.69■□□□□ 0.42
SKA2-209ENST00000583976 USP15Q9Y4E8 981 aaPredicted RBP17.69■□□□□ 0.42
SKA2-209ENST00000583976 MAFBQ9Y5Q3 323 aaPredicted RBP17.69■□□□□ 0.42
SKA2-209ENST00000583976 EDIL3O43854 480 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 ZNF862O60290 1169 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 FGF18O76093 207 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 CTDNEP1O95476 244 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 EYA4O95677 639 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 CRYBB1P53674 252 aaPredicted RBP17.68■□□□□ 0.42
SKA2-209ENST00000583976 DSC3Q14574 896 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
SKA2-209ENST00000583976 SLC24A5Q71RS6 500 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 CCDC83Q8IWF9 413 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 TRIM22Q8IYM9 498 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 THNSL1Q8IYQ7 743 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 BBXQ8WY36 941 aaPredicted RBP17.68■□□□□ 0.42
SKA2-209ENST00000583976 PPP2R3CQ969Q6 453 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 ZSCAN31Q96LW9 406 aaPredicted RBP17.68■□□□□ 0.42
SKA2-209ENST00000583976 CWH43Q9H720 699 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 C1orf112Q9NSG2 853 aa17.68■□□□□ 0.42
SKA2-209ENST00000583976 TYW1Q9NV66 732 aaKnown RBP17.68■□□□□ 0.42
SKA2-209ENST00000583976 VPS54Q9P1Q0 977 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms