RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 ATP6V0A4Q9HBG4 840 aa10.22□□□□□ -0.77
CASC3-209ENST00000583902 PARVGQ9HBI0 331 aa10.22□□□□□ -0.77
CASC3-209ENST00000583902 CYP26B1Q9NR63 512 aa10.22□□□□□ -0.77
CASC3-209ENST00000583902 MYMKA6NI61 221 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 H3BRB1 525 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 PSMA7O14818 248 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 IKBKBO14920 756 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 EIF3DO15371 548 aaKnown RBP eCLIP10.21□□□□□ -0.77
CASC3-209ENST00000583902 ASAP2O43150 1006 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 DYNC1LI2O43237 492 aaPredicted RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 FAM13AO94988 1023 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 STBD1O95210 358 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 FGFR1OPO95684 399 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 LGALS2P05162 132 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 SSBP05455 408 aaKnown RBP eCLIP10.21□□□□□ -0.77
CASC3-209ENST00000583902 DNM2P50570 870 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 SMTNP53814 917 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 PSMC6P62333 389 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 HTRA3P83110 453 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 CUL4BQ13620 913 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 GIT2Q14161 759 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 MXD4Q14582 209 aaPredicted RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 TARBP2Q15633 366 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 CCL14Q16627 93 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 FSCN1Q16658 493 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 XKR9Q5GH70 373 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 ANO5Q75V66 913 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 KCNK18Q7Z418 384 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 AFG1LQ8WV93 481 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 HVCN1Q96D96 273 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 DNAJC19Q96DA6 116 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 NTPCRQ9BSD7 190 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 ST6GALNAC4Q9H4F1 302 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 DHX33Q9H6R0 707 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 HMX1Q9NP08 348 aaPredicted RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 PANK4Q9NVE7 773 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 CGNQ9P2M7 1197 aaKnown RBP10.21□□□□□ -0.77
CASC3-209ENST00000583902 MAN1B1Q9UKM7 699 aa10.21□□□□□ -0.77
CASC3-209ENST00000583902 NRCAMQ92823 1304 aa10.21□□□□□ -0.78
CASC3-209ENST00000583902 MOXD2PA6NHM9 499 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 KLRC4O43908 158 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 ZNF862O60290 1169 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 F2P00734 622 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 IDEP14735 1019 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 TMOD1P28289 359 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 CTCFP49711 727 aaPredicted RBP10.2□□□□□ -0.78
CASC3-209ENST00000583902 ZNF165P49910 485 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 POU5F1BQ06416 359 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 TBC1D8BQ0IIM8 1120 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 PCBP1Q15365 356 aaKnown RBP eCLIP10.2□□□□□ -0.78
CASC3-209ENST00000583902 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 ARSHQ5FYA8 562 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 HERC4Q5GLZ8 1057 aaPredicted RBP10.2□□□□□ -0.78
CASC3-209ENST00000583902 FAM26FQ5R3K3 315 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 IER5Q5VY09 327 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 RNF180Q86T96 592 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 GUF1Q8N442 669 aaKnown RBP10.2□□□□□ -0.78
CASC3-209ENST00000583902 ARRDC4Q8NCT1 418 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 PIGOQ8TEQ8 1089 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 SPIRE2Q8WWL2 714 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 PCYT2Q99447 389 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 C16orf70Q9BSU1 422 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 PDLIM7Q9NR12 457 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 SEPT9Q9UHD8 586 aaPredicted RBP10.2□□□□□ -0.78
CASC3-209ENST00000583902 DDX20Q9UHI6 824 aaKnown RBP10.2□□□□□ -0.78
CASC3-209ENST00000583902 PTPN22Q9Y2R2 807 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 TRIM17Q9Y577 477 aa10.2□□□□□ -0.78
CASC3-209ENST00000583902 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 IGKV6-21A0A0C4DH24 114 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 GOLGA6L3A6NEY3 463 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 BECN2A8MW95 431 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 MAFO75444 373 aaPredicted RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 PLS3P13797 630 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 POLGP54098 1239 aaPredicted RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 SP4Q02446 784 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 LRRC63Q05C16 580 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 PTPN11Q06124 597 aaPredicted RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 COASYQ13057 564 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 DMP1Q13316 513 aaPredicted RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 DHX8Q14562 1220 aaKnown RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 PLCB4Q15147 1175 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 UGCGQ16739 394 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 BMT2Q1RMZ1 405 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 L1TD1Q5T7N2 865 aaKnown RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 CTU1Q7Z7A3 348 aaKnown RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 KLHDC9Q8NEP7 349 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 GOLGA5Q8TBA6 731 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 ENOX1Q8TC92 643 aaKnown RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 NOC3LQ8WTT2 800 aaKnown RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 TMEM174Q8WUU8 243 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 COPS5Q92905 334 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 IFT74Q96LB3 600 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 UIMC1Q96RL1 719 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 REEP2Q9BRK0 252 aa10.19□□□□□ -0.78
CASC3-209ENST00000583902 MTG1Q9BT17 334 aaPredicted RBP10.19□□□□□ -0.78
CASC3-209ENST00000583902 BLZF1Q9H2G9 400 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms