RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 KCNA10Q16322 511 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 ATAT1Q5SQI0 421 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 IQCEQ6IPM2 695 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 FSTL4Q6MZW2 842 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 KIAA1958Q8N8K9 716 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 ZBTB34Q8NCN2 500 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 PPP1R35Q8TAP8 253 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 HPS3Q969F9 1004 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 PLCD4Q9BRC7 762 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 GTPBP4Q9BZE4 634 aaKnown RBP6.03□□□□□ -1.44
SS18-223ENST00000583595 ZDHHC5Q9C0B5 715 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 TMX4Q9H1E5 349 aaPredicted RBP6.03□□□□□ -1.44
SS18-223ENST00000583595 CDIP1Q9H305 208 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 SMURF1Q9HCE7 757 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 NGRNQ9NPE2 291 aaKnown RBP6.03□□□□□ -1.44
SS18-223ENST00000583595 CCM2LQ9NUG4 571 aaPredicted RBP6.03□□□□□ -1.44
SS18-223ENST00000583595 AP5S1Q9NUS5 200 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 ERVK13-1Q9NX77 482 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 ANAPC4Q9UJX5 808 aa6.03□□□□□ -1.44
SS18-223ENST00000583595 LAS1LQ9Y4W2 734 aaKnown RBP6.03□□□□□ -1.44
SS18-223ENST00000583595 ABHD14A-ACY1A0A1B0GW23 586 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 SLC12A8A0AV02 714 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 F5H423 210 aaPredicted RBP6.02□□□□□ -1.45
SS18-223ENST00000583595 SEMA7AO75326 666 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 AMY2AP04746 511 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 GSTM1P09488 218 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 SETSIPP0DME0 302 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 COL6A2P12110 1019 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 PAMP19021 973 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 AMY2BP19961 511 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 GRK3P35626 688 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 BCL6P41182 706 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 DLG4P78352 724 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 KCNAB2Q13303 367 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 KIR3DS1Q14943 382 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 ZNF174Q15697 407 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 LONRF1Q17RB8 773 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 HSF5Q4G112 596 aaPredicted RBP6.02□□□□□ -1.45
SS18-223ENST00000583595 ERICH6BQ5W0A0 696 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 GALNT18Q6P9A2 607 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 LILRA6Q6PI73 481 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 TEX2Q8IWB9 1127 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 GRAMD1CQ8IYS0 662 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 CPXCR1Q8N123 301 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 ZNF610Q8N9Z0 462 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 TBCBQ99426 244 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 MMP19Q99542 508 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 BOCQ9BWV1 1114 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 SMOC1Q9H4F8 434 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 DNAJC28Q9NX36 388 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 PCDHGB6Q9Y5F9 930 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 TAF6LQ9Y6J9 622 aa6.02□□□□□ -1.45
SS18-223ENST00000583595 MORC2Q9Y6X9 1032 aaPredicted RBP6.02□□□□□ -1.45
SS18-223ENST00000583595 NACADO15069 1562 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 NPHP3-ACAD11A0A0J9YXS1 232 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 TEX51A0A1B0GUA7 166 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 TCRBV5S4A2TA0A5A2 114 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 WTIPA6NIX2 430 aaPredicted RBP6.01□□□□□ -1.45
SS18-223ENST00000583595 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 PQBP1O60828 265 aaKnown RBP6.01□□□□□ -1.45
SS18-223ENST00000583595 PNLIPP16233 465 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 C5AR1P21730 350 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 SDHBP21912 280 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 PTX3P26022 381 aaPredicted RBP6.01□□□□□ -1.45
SS18-223ENST00000583595 PHC1P78364 1004 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 IRF9Q00978 393 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 SRSF2Q01130 221 aaKnown RBP6.01□□□□□ -1.45
SS18-223ENST00000583595 LSAMPQ13449 338 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 FBLN7Q53RD9 439 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 RTP2Q5QGT7 225 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 RCSD1Q6JBY9 416 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 ARHGAP36Q6ZRI8 547 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 LCNL1Q6ZST4 164 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 TTLL7Q6ZT98 887 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 CCDC149Q6ZUS6 474 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 OVCH2Q7RTZ1 564 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 ZNF354CQ86Y25 554 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 APOL5Q9BWW9 433 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 SGPP1Q9BX95 441 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 C9orf78Q9NZ63 289 aaPredicted RBP6.01□□□□□ -1.45
SS18-223ENST00000583595 LZTS1Q9Y250 596 aa6.01□□□□□ -1.45
SS18-223ENST00000583595 A0A1W2PQ45 241 aaPredicted RBP6□□□□□ -1.45
SS18-223ENST00000583595 A0A1W2PQY0 241 aa6□□□□□ -1.45
SS18-223ENST00000583595 ZBED1O96006 694 aa6□□□□□ -1.45
SS18-223ENST00000583595 ZSCAN22P10073 491 aaPredicted RBP6□□□□□ -1.45
SS18-223ENST00000583595 ZKSCAN1P17029 563 aaPredicted RBP6□□□□□ -1.45
SS18-223ENST00000583595 PDCP20941 246 aa6□□□□□ -1.45
SS18-223ENST00000583595 CEBPAP49715 358 aaPredicted RBP6□□□□□ -1.45
SS18-223ENST00000583595 KIF11P52732 1056 aa6□□□□□ -1.45
SS18-223ENST00000583595 LINC00310P59036 64 aa6□□□□□ -1.45
SS18-223ENST00000583595 KIAA0753Q2KHM9 967 aa6□□□□□ -1.45
SS18-223ENST00000583595 CT83Q5H943 113 aa6□□□□□ -1.45
SS18-223ENST00000583595 TOR2AQ5JU69 321 aa6□□□□□ -1.45
SS18-223ENST00000583595 EEF1DP3Q658K8 133 aa6□□□□□ -1.45
SS18-223ENST00000583595 CIAPIN1Q6FI81 312 aa6□□□□□ -1.45
SS18-223ENST00000583595 FRMD7Q6ZUT3 714 aa6□□□□□ -1.45
SS18-223ENST00000583595 SRGAP1Q7Z6B7 1085 aa6□□□□□ -1.45
SS18-223ENST00000583595 SLCO6A1Q86UG4 719 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms