RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 PDE4BQ07343 736 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 ZNF543Q08ER8 600 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 SPEM2Q0P670 501 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 CCINQ13939 588 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 DIEXFQ68CQ4 756 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 RAB44Q7Z6P3 723 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 DCAF4Q8WV16 495 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 ANKS1AQ92625 1134 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 ZNF775Q96BV0 537 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 MTG1Q9BT17 334 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 LRFN3Q9BTN0 628 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 BCAS3Q9H6U6 928 aa9.26□□□□□ -0.93
PPP4R1-225ENST00000583438 PTPDC1A2A3K4 754 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 GPR182O15218 404 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 PPP1R11O60927 126 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 SASH3O75995 380 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 MMP3P08254 477 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 KRT76Q01546 638 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 NMIQ13287 307 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 ALX1Q15699 326 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 LY6KQ17RY6 165 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 TMEM67Q5HYA8 995 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 RRP12Q5JTH9 1297 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 KRT25Q7Z3Z0 450 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 IL31RAQ8NI17 732 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 AFG1LQ8WV93 481 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 IRF7Q92985 503 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 TAAR1Q96RJ0 339 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 ZKSCAN3Q9BRR0 538 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 UBA5Q9GZZ9 404 aa9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 FNDC3AQ9Y2H6 1198 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-225ENST00000583438 KMT2EQ8IZD2 1858 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 RPLP1P05386 114 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 ZNF286BP0CG31 522 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 HSPD1P10809 573 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 TOP1P11387 765 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 MX2P20592 715 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 USH1GQ495M9 461 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 FAM47CQ5HY64 1035 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 NFRKBQ6P4R8 1299 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 RNF207Q6ZRF8 634 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 SLC9A7Q96T83 725 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 NACAP1Q9BZK3 213 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 SUGCTQ9HAC7 445 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 ZFATQ9P243 1243 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 WDR81Q562E7 1941 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 WDR19Q8NEZ3 1342 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 KAT6AQ92794 2004 aa9.24□□□□□ -0.93
PPP4R1-225ENST00000583438 TECTAO75443 2155 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 HAS3O00219 553 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 SORBS3O60504 671 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 CXCL10P02778 98 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 BMP4P12644 408 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 PDE1AP54750 535 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 CHMP4BP1P59074 171 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 RBL2Q08999 1139 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 PPP2R5BQ15173 497 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 XKR5Q6UX68 686 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 RPUSD2Q8IZ73 545 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 SYTL5Q8TDW5 730 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 GPATCH3Q96I76 525 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 MTIF3Q9H2K0 278 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 ZNF287Q9HBT7 754 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 TCP11L1Q9NUJ3 509 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 TMEM63CQ9P1W3 806 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 HDAC6Q9UBN7 1215 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 MTUS1Q9ULD2 1270 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 PIEZO1Q92508 2521 aa9.23□□□□□ -0.93
PPP4R1-225ENST00000583438 LINC01553A4QN01 128 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 ANKRD33BA6NCL7 494 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 ZEB2O60315 1214 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 PFKMP08237 780 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 TXNP10599 105 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 CKBP12277 381 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 CPT1AP50416 773 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 SP2Q02086 613 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 COL9A3Q14050 684 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 PTGISQ16647 500 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 ZNF438Q7Z4V0 828 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 SESTD1Q86VW0 696 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 TTC16Q8NEE8 873 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 SCFD2Q8WU76 684 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 BHMTQ93088 406 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 C17orf80Q9BSJ5 609 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 GTF2IRD1Q9UHL9 959 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 TAF6LQ9Y6J9 622 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 ZMYM6O95789 1325 aa9.22□□□□□ -0.93
PPP4R1-225ENST00000583438 TTC3P53804 2025 aa9.21□□□□□ -0.93
PPP4R1-225ENST00000583438 WFS1O76024 890 aa9.21□□□□□ -0.94
PPP4R1-225ENST00000583438 F2P00734 622 aa9.21□□□□□ -0.94
PPP4R1-225ENST00000583438 LINC00271P0C7V0 271 aa9.21□□□□□ -0.94
PPP4R1-225ENST00000583438 HOXD8P13378 290 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-225ENST00000583438 IL9P15248 144 aa9.21□□□□□ -0.94
PPP4R1-225ENST00000583438 NFKB1P19838 968 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms