RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 PTPN11Q06124 597 aaPredicted RBP15.18■□□□□ 0.02
ITGB4-209ENST00000583327 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
ITGB4-209ENST00000583327 NBPF20Q3BBV1 942 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 EXOC8Q8IYI6 725 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 GSDMAQ96QA5 445 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 BLZF1Q9H2G9 400 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 TRPC6Q9Y210 931 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 MYH9P35579 1960 aaKnown RBP15.18■□□□□ 0.02
ITGB4-209ENST00000583327 SCN10AQ9Y5Y9 1956 aa15.18■□□□□ 0.02
ITGB4-209ENST00000583327 NPHP3-ACAD11A0A0J9YXS1 232 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 A0A1W2PQ45 241 aaPredicted RBP15.17■□□□□ 0.02
ITGB4-209ENST00000583327 A0A1W2PQY0 241 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 MAGEB2O15479 319 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 GAS2O43903 313 aaKnown RBP15.17■□□□□ 0.02
ITGB4-209ENST00000583327 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
ITGB4-209ENST00000583327 COL6A1P12109 1028 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 KLRC1P26715 233 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 ARL2P36404 184 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 CDK7P50613 346 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 RTP1P59025 263 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 KCNB1Q14721 858 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 GRIK4Q16099 956 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 UNC13DQ70J99 1090 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 TRMT1LQ7Z2T5 733 aaKnown RBP15.17■□□□□ 0.02
ITGB4-209ENST00000583327 ANKLE1Q8NAG6 615 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 MCPH1Q8NEM0 835 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 TRAPPC12Q8WVT3 735 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
ITGB4-209ENST00000583327 REEP2Q9BRK0 252 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 SEZ6LQ9BYH1 1024 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 BMP2KQ9NSY1 1161 aaPredicted RBP15.17■□□□□ 0.02
ITGB4-209ENST00000583327 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 HDAC6Q9UBN7 1215 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 LOXHD1Q8IVV2 1947 aa15.17■□□□□ 0.02
ITGB4-209ENST00000583327 ARID2Q68CP9 1835 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 RHOBTB3O94955 611 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 MYCP01106 439 aaPredicted RBP15.16■□□□□ 0.02
ITGB4-209ENST00000583327 RPN1P04843 607 aaKnown RBP15.16■□□□□ 0.02
ITGB4-209ENST00000583327 SSBP05455 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
ITGB4-209ENST00000583327 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 ITGA7Q13683 1181 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 DYMQ7RTS9 669 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 ERCC4Q92889 916 aaPredicted RBP15.16■□□□□ 0.02
ITGB4-209ENST00000583327 KCNN1Q92952 543 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 GLT1D1Q96MS3 346 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 FIZ1Q96SL8 496 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 JPH2Q9BR39 696 aaPredicted RBP15.16■□□□□ 0.02
ITGB4-209ENST00000583327 NTPCRQ9BSD7 190 aaKnown RBP15.16■□□□□ 0.02
ITGB4-209ENST00000583327 GTF2IRD1Q9UHL9 959 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 PCDHA2Q9Y5H9 948 aa15.16■□□□□ 0.02
ITGB4-209ENST00000583327 RSPH10B2B2RC85 870 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 KBTBD13C9JR72 458 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 USO1O60763 962 aaKnown RBP15.15■□□□□ 0.02
ITGB4-209ENST00000583327 HIP1RO75146 1068 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 SMC2O95347 1197 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 TFRCP02786 760 aaKnown RBP15.15■□□□□ 0.02
ITGB4-209ENST00000583327 RSPH10BP0C881 870 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 TBC1D8BQ0IIM8 1120 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 EMC2Q15006 297 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 KMT5BQ4FZB7 885 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 IER5Q5VY09 327 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 SLC7A3Q8WY07 619 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 FUCA2Q9BTY2 467 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 C17orf75Q9HAS0 396 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 MAN1B1Q9UKM7 699 aa15.15■□□□□ 0.02
ITGB4-209ENST00000583327 BRCA2P51587 3418 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 SMIM35A0A1B0GVV1 85 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 GNAT1P11488 350 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 BMP6P22004 513 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 POLGP54098 1239 aaPredicted RBP15.14■□□□□ 0.01
ITGB4-209ENST00000583327 PSMD2Q13200 908 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 DRP2Q13474 957 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 MORC3Q14149 939 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 C1orf53Q5VUE5 145 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 GDF6Q6KF10 455 aaPredicted RBP15.14■□□□□ 0.01
ITGB4-209ENST00000583327 EFCAB12Q6NXP0 572 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 RPAINQ86UA6 219 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 KIAA0319LQ8IZA0 1049 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 C7orf31Q8N865 590 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 TRIML1Q8N9V2 468 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 KIFAP3Q92845 792 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 SMARCE1Q969G3 411 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 DRC1Q96MC2 740 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 STRA6Q9BX79 667 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 POLD4Q9HCU8 107 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 GPRC5CQ9NQ84 441 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 OLFML3Q9NRN5 406 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 SEL1LQ9UBV2 794 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 COL4A3BPQ9Y5P4 624 aa15.14■□□□□ 0.01
ITGB4-209ENST00000583327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.13■□□□□ 0.01
ITGB4-209ENST00000583327 C17orf102A2RUQ5 167 aa15.13■□□□□ 0.01
ITGB4-209ENST00000583327 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms