RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 HIDE1A8MVS5 230 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 ADAMTS3O15072 1205 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 GPR182O15218 404 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 GPR32O75388 356 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 LAG3P18627 525 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 ZNF76P36508 570 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 TECP42680 631 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 AP3B2Q13367 1082 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 RTN1Q16799 776 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 SWSAP1Q6NVH7 229 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 ANKRD54Q6NXT1 300 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 LLGL2Q6P1M3 1020 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 SYCE2Q6PIF2 218 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 LRRC55Q6ZSA7 311 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
SREBF1-221ENST00000583080 PLA2G4DQ86XP0 818 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 MRPS27Q92552 414 aaKnown RBP18.37■□□□□ 0.53
SREBF1-221ENST00000583080 TCF25Q9BQ70 676 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 ANO2Q9NQ90 1003 aa18.37■□□□□ 0.53
SREBF1-221ENST00000583080 RBM28Q9NW13 759 aaKnown RBP18.37■□□□□ 0.53
SREBF1-221ENST00000583080 V9GY48 417 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-221ENST00000583080 CLCN3P51790 818 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 CRYBB1P53674 252 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-221ENST00000583080 FAM189BP81408 668 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 PKN1Q16512 942 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 PTPN21Q16825 1174 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 JAKMIP3Q5VZ66 844 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 MIS18BP1Q6P0N0 1132 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 TMEM184AQ6ZMB5 413 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 CRYGNQ8WXF5 182 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 CASD1Q96PB1 797 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 ENTPD7Q9NQZ7 604 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 BARHL2Q9NY43 387 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 USP34Q70CQ2 3546 aa18.36■□□□□ 0.53
SREBF1-221ENST00000583080 FSD2A1L4K1 749 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 IPO5O00410 1097 aaKnown RBP18.35■□□□□ 0.53
SREBF1-221ENST00000583080 PDGFBP01127 241 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-221ENST00000583080 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-221ENST00000583080 PLCB3Q01970 1234 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 ODR4Q5SWX8 454 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 PDE12Q6L8Q7 609 aaKnown RBP18.35■□□□□ 0.53
SREBF1-221ENST00000583080 TEX2Q8IWB9 1127 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 CKAP2LQ8IYA6 745 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 METTL13Q8N6R0 699 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 TMEM117Q9H0C3 514 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
SREBF1-221ENST00000583080 FAM217BQ9NTX9 383 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-221ENST00000583080 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
SREBF1-221ENST00000583080 GOLGA8AA7E2F4 631 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 GOLGA8BA8MQT2 603 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 hCG_1984214I3L0E3 225 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 ZBTB43O43298 467 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 CDC27P30260 824 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 KCNT2Q6UVM3 1135 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 LRRC43Q8N309 656 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 ZNF713Q8N859 430 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-221ENST00000583080 RASGRP4Q8TDF6 673 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 BBXQ8WY36 941 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-221ENST00000583080 ZNF668Q96K58 619 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-221ENST00000583080 PRRX2Q99811 253 aa18.34■□□□□ 0.53
SREBF1-221ENST00000583080 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-221ENST00000583080 MAFBQ9Y5Q3 323 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-221ENST00000583080 MYH9P35579 1960 aaKnown RBP18.33■□□□□ 0.53
SREBF1-221ENST00000583080 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.52
SREBF1-221ENST00000583080 CLLU1OSQ5K130 101 aa18.33■□□□□ 0.52
SREBF1-221ENST00000583080 FAM43BQ6ZT52 329 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-221ENST00000583080 LRRC71Q8N4P6 559 aa18.33■□□□□ 0.52
SREBF1-221ENST00000583080 LINC01465Q8N7H1 131 aa18.33■□□□□ 0.52
SREBF1-221ENST00000583080 ZNF558Q96NG5 402 aa18.33■□□□□ 0.52
SREBF1-221ENST00000583080 ZNF577Q9BSK1 485 aa18.33■□□□□ 0.52
SREBF1-221ENST00000583080 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 CYP3A4P08684 503 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 AVPR2P30518 371 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 NLRP11P59045 1033 aaKnown RBP18.32■□□□□ 0.52
SREBF1-221ENST00000583080 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
SREBF1-221ENST00000583080 ZBTB33Q86T24 672 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 RNF169Q8NCN4 708 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 ADAMTS10Q9H324 1103 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 NGRNQ9NPE2 291 aaKnown RBP18.32■□□□□ 0.52
SREBF1-221ENST00000583080 TSHZ2Q9NRE2 1034 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 GABBR1Q9UBS5 961 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 AKT3Q9Y243 479 aa18.32■□□□□ 0.52
SREBF1-221ENST00000583080 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 PPM1AP35813 382 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 ADCK5Q3MIX3 580 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 ECHDC2Q86YB7 292 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 GLT8D2Q9H1C3 349 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 SMOC2Q9H3U7 446 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 POMKQ9H5K3 350 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 PUF60Q9UHX1 559 aaKnown RBP18.31■□□□□ 0.52
SREBF1-221ENST00000583080 HCFC2Q9Y5Z7 792 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 PLXNA3P51805 1871 aa18.31■□□□□ 0.52
SREBF1-221ENST00000583080 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
SREBF1-221ENST00000583080 HOXA2O43364 376 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms