RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SKAP1Q86WV1 359 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 ZNF713Q8N859 430 aaPredicted RBP15.42■□□□□ 0.06
SS18-222ENST00000582792 RASGRP4Q8TDF6 673 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 ASIC4Q96FT7 647 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 ELAC1Q9H777 363 aaKnown RBP15.42■□□□□ 0.06
SS18-222ENST00000582792 ATP6V0A4Q9HBG4 840 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 ZNF302Q9NR11 478 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 EVPLQ92817 2033 aa15.42■□□□□ 0.06
SS18-222ENST00000582792 SMCO2A6NFE2 343 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 DHX15O43143 795 aaKnown RBP15.41■□□□□ 0.06
SS18-222ENST00000582792 C22orf31O95567 290 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 SRGAP2BP0DMP2 458 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 FGFR1P11362 822 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 ATP4AP20648 1035 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 ZNF76P36508 570 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 PLCB3Q01970 1234 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 PTPN21Q16825 1174 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 KIZQ2M2Z5 673 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 SWSAP1Q6NVH7 229 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 MIS18BP1Q6P0N0 1132 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 MRPS27Q92552 414 aaKnown RBP15.41■□□□□ 0.06
SS18-222ENST00000582792 PPP1R16BQ96T49 567 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 OSMRQ99650 979 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 S1PR5Q9H228 398 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 BARHL2Q9NY43 387 aa15.41■□□□□ 0.06
SS18-222ENST00000582792 FAM86B1E9PN63 330 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 GPR32O75388 356 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 FAM86B2P0C5J1 330 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 TECP42680 631 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 APOBRQ0VD83 1088 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 DSC3Q14574 896 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 RTN1Q16799 776 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 PLPP4Q5VZY2 271 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 ANKRD54Q6NXT1 300 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 PLA2G4DQ86XP0 818 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 BBXQ8WY36 941 aaPredicted RBP15.4■□□□□ 0.06
SS18-222ENST00000582792 TCF25Q9BQ70 676 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 TMEM117Q9H0C3 514 aa15.4■□□□□ 0.06
SS18-222ENST00000582792 PUF60Q9UHX1 559 aaKnown RBP15.4■□□□□ 0.06
SS18-222ENST00000582792 MAFBQ9Y5Q3 323 aaPredicted RBP15.4■□□□□ 0.06
SS18-222ENST00000582792 V9GY48 417 aaPredicted RBP15.4■□□□□ 0.06
SS18-222ENST00000582792 IGLV3-22A0A075B6J6 115 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 IPO5O00410 1097 aaKnown RBP15.39■□□□□ 0.05
SS18-222ENST00000582792 HOXA2O43364 376 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 VTNP04004 478 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 VCPP55072 806 aaKnown RBP15.39■□□□□ 0.05
SS18-222ENST00000582792 SYCE2Q6PIF2 218 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 LRRC55Q6ZSA7 311 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 CKAP2LQ8IYA6 745 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 CRYGNQ8WXF5 182 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 CASD1Q96PB1 797 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 NGRNQ9NPE2 291 aaKnown RBP15.39■□□□□ 0.05
SS18-222ENST00000582792 ENTPD7Q9NQZ7 604 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 BRPF3Q9ULD4 1205 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 ZFHX2Q9C0A1 2572 aaPredicted RBP15.39■□□□□ 0.05
SS18-222ENST00000582792 CACNA1HO95180 2353 aa15.39■□□□□ 0.05
SS18-222ENST00000582792 HIDE1A8MVS5 230 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 ZBTB43O43298 467 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 ST18O60284 1047 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 CDC45O75419 566 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 CYP3A4P08684 503 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 HOXB8P17481 243 aaPredicted RBP15.38■□□□□ 0.05
SS18-222ENST00000582792 AVPR2P30518 371 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 PPM1AP35813 382 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
SS18-222ENST00000582792 JAKMIP3Q5VZ66 844 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 ZNF746Q6NUN9 644 aaPredicted RBP15.38■□□□□ 0.05
SS18-222ENST00000582792 KCNT2Q6UVM3 1135 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 METTL13Q8N6R0 699 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 ZNF577Q9BSK1 485 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 TBC1D22BQ9NU19 505 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 CEP131Q9UPN4 1083 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
SS18-222ENST00000582792 MYH9P35579 1960 aaKnown RBP15.38■□□□□ 0.05
SS18-222ENST00000582792 MAGEB2O15479 319 aa15.37■□□□□ 0.05
SS18-222ENST00000582792 SETQ01105 290 aaPredicted RBP15.37■□□□□ 0.05
SS18-222ENST00000582792 KRT17Q04695 432 aa15.37■□□□□ 0.05
SS18-222ENST00000582792 LLGL2Q6P1M3 1020 aa15.37■□□□□ 0.05
SS18-222ENST00000582792 SMAP1Q8IYB5 467 aaPredicted RBP15.37■□□□□ 0.05
SS18-222ENST00000582792 LRRC43Q8N309 656 aa15.37■□□□□ 0.05
SS18-222ENST00000582792 ZNF558Q96NG5 402 aa15.37■□□□□ 0.05
SS18-222ENST00000582792 APOL5Q9BWW9 433 aa15.37■□□□□ 0.05
SS18-222ENST00000582792 VPS13AQ96RL7 3174 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 PSAPP07602 524 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
SS18-222ENST00000582792 PBX3P40426 434 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 CLCN3P51790 818 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 NLRP11P59045 1033 aaKnown RBP15.36■□□□□ 0.05
SS18-222ENST00000582792 RNF20Q5VTR2 975 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 DHX32Q7L7V1 743 aaKnown RBP15.36■□□□□ 0.05
SS18-222ENST00000582792 TRMT1LQ7Z2T5 733 aaKnown RBP15.36■□□□□ 0.05
SS18-222ENST00000582792 TMC7Q7Z402 723 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 ZBTB33Q86T24 672 aa15.36■□□□□ 0.05
SS18-222ENST00000582792 ECHDC2Q86YB7 292 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms