RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	LUC7L3	O95232	432 aa	Known RBP	6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	STAG3L1	P0CL83	205 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	LAG3	P18627	525 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	PSEN2	P49810	448 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	PPP4C	P60510	307 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	LMOD3	Q0VAK6	560 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	LMAN2	Q12907	356 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	GIT2	Q14161	759 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	PAN2	Q504Q3	1202 aa	Known RBP	6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	TMC7	Q7Z402	723 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	GLRX5	Q86SX6	157 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	PPFIBP1	Q86W92	1011 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	SIAH1	Q8IUQ4	282 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	MAPKAPK5	Q8IW41	473 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	TGFBRAP1	Q8WUH2	860 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	FGF14	Q92915	247 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	CHMP4A	Q9BY43	222 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	DUSP15	Q9H1R2	295 aa	Predicted RBP	6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	ACAD9	Q9H845	621 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	ABCF2	Q9UG63	623 aa		6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	SEPT9	Q9UHD8	586 aa	Predicted RBP	6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	DDX49	Q9Y6V7	483 aa	Known RBP	6.06	□□□□□ -1.44
MSI2-216	ENST00000582772	MEFV	O15553	781 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	TLX3	O43711	291 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	ZMYND10	O75800	440 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	CAST	P20810	708 aa	Known RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	CXADR	P78310	365 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	RASGRF1	Q13972	1273 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	BEND3	Q5T5X7	828 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	ERICH6	Q7L0X2	663 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	LRRC47	Q8N1G4	583 aa	Known RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	CCER1	Q8TC90	406 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	SCFD2	Q8WU76	684 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	BAP1	Q92560	729 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	DNASE1L2	Q92874	299 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	KIF2C	Q99661	725 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	SLF1	Q9BQI6	1058 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	RPP25	Q9BUL9	199 aa	Known RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	CWH43	Q9H720	699 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	SLC38A10	Q9HBR0	1119 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	ARHGEF10L	Q9HCE6	1279 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	GREB1L	Q9C091	1923 aa	Predicted RBP	6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	MYO16	Q9Y6X6	1858 aa		6.05	□□□□□ -1.44
MSI2-216	ENST00000582772	PHLPP2	Q6ZVD8	1323 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	CUBN	O60494	3623 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	THADA	Q6YHU6	1953 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	RAD21	O60216	631 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	CHRNB1	P11230	501 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	USP5	P45974	858 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	PHKA1	P46020	1223 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	IRX4	P78413	519 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	ATP8B2	P98198	1209 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	CREB5	Q02930	508 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	GABPA	Q06546	454 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	PTGDR	Q13258	359 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	MFSD10	Q14728	455 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	TRIP6	Q15654	476 aa	Known RBP	6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	ELF2	Q15723	593 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	KIAA0753	Q2KHM9	967 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	CC2D1B	Q5T0F9	858 aa	Known RBP	6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	HEATR6	Q6AI08	1181 aa	Known RBP	6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	TMEM179	Q6ZVK1	233 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	MTSS1L	Q765P7	747 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	STK31	Q9BXU1	1019 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	FTHL17	Q9BXU8	183 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	STARD5	Q9NSY2	213 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	APOBEC2	Q9Y235	224 aa	Known RBP	6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	KNTC1	P50748	2209 aa		6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	ZNF469	Q96JG9	3925 aa	Predicted RBP	6.04	□□□□□ -1.44
MSI2-216	ENST00000582772	RHOBTB1	O94844	696 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	BAG3	O95817	575 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	CTSH	P09668	335 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	CCDC192	P0DO97	292 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	GATM	P50440	423 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	UCN	P55089	124 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	CHMP4BP1	P59074	171 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	KRT17	Q04695	432 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	LPIN1	Q14693	890 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	DGKD	Q16760	1214 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	PARM1	Q6UWI2	310 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	GALNT15	Q8N3T1	639 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	PRPF38A	Q8NAV1	312 aa	Known RBP	6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	COPS5	Q92905	334 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	EMID1	Q96A84	441 aa	Predicted RBP	6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	LMAN1L	Q9HAT1	526 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	DOCK6	Q96HP0	2047 aa		6.03	□□□□□ -1.44
MSI2-216	ENST00000582772	ABCA7	Q8IZY2	2146 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	HLA-E	P13747	358 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	CLCN4	P51793	760 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	ICA1	Q05084	483 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	SRSF11	Q05519	484 aa	Known RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	ARHGAP1	Q07960	439 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	NFATC3	Q12968	1075 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	BMS1	Q14692	1282 aa	Known RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	KARS	Q15046	597 aa	Known RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	RABL6	Q3YEC7	729 aa	Predicted RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	CCDC30	Q5VVM6	783 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	ZNF280B	Q86YH2	543 aa		6.02	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms