RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 LRRC55Q6ZSA7 311 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 SLC39A11Q8N1S5 342 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 ZBTB44Q8NCP5 570 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 SLC22A17Q8WUG5 538 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 NXPE3Q969Y0 559 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 CASD1Q96PB1 797 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 SENP7Q9BQF6 1050 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 ELAC1Q9H777 363 aaKnown RBP10.65□□□□□ -0.7
GGA3-212ENST00000582376 ZSCAN32Q9NX65 697 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 RTEL1Q9NZ71 1219 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.65□□□□□ -0.7
GGA3-212ENST00000582376 DOCK5Q9H7D0 1870 aa10.65□□□□□ -0.7
GGA3-212ENST00000582376 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.64□□□□□ -0.71
GGA3-212ENST00000582376 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 LILRB5O75023 590 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 LRRN2O75325 713 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 INSRRP14616 1297 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 FAM189BP81408 668 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 SHC2P98077 582 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 PPFIBP1Q86W92 1011 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 DGKHQ86XP1 1220 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 ABI1Q8IZP0 508 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 VPS52Q8N1B4 723 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 NME8Q8N427 588 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 GIMAP8Q8ND71 665 aaPredicted RBP10.64□□□□□ -0.71
GGA3-212ENST00000582376 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 SEPT1Q8WYJ6 367 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 DDX1Q92499 740 aaKnown RBP10.64□□□□□ -0.71
GGA3-212ENST00000582376 BCO2Q9BYV7 579 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 ZBP1Q9H171 429 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 SMARCAD1Q9H4L7 1026 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 GINS2Q9Y248 185 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 NOC2LQ9Y3T9 749 aaKnown RBP10.64□□□□□ -0.71
GGA3-212ENST00000582376 PCDHA2Q9Y5H9 948 aa10.64□□□□□ -0.71
GGA3-212ENST00000582376 GPR182O15218 404 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
GGA3-212ENST00000582376 PARP1P09874 1014 aaKnown RBP10.63□□□□□ -0.71
GGA3-212ENST00000582376 STARD6P59095 220 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 SPEM2Q0P670 501 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 ALX1Q15699 326 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 C15orf39Q6ZRI6 1047 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 AUTS2Q8WXX7 1259 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 TNPO1Q92973 898 aaKnown RBP10.63□□□□□ -0.71
GGA3-212ENST00000582376 TMEM169Q96HH4 297 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 SHDQ96IW2 340 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 EPS15L1Q9UBC2 864 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 ST3GAL5Q9UNP4 418 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 IRAK3Q9Y616 596 aa10.63□□□□□ -0.71
GGA3-212ENST00000582376 SMIM35A0A1B0GVV1 85 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 GSTTP1A0A1W2PQM5 241 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 PPP1R11O60927 126 aaPredicted RBP10.62□□□□□ -0.71
GGA3-212ENST00000582376 CTSAP10619 480 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 METAP2P50579 478 aaKnown RBP eCLIP10.62□□□□□ -0.71
GGA3-212ENST00000582376 N4BP2L1Q5TBK1 243 aaPredicted RBP10.62□□□□□ -0.71
GGA3-212ENST00000582376 MFSD6Q6ZSS7 791 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 NLRX1Q86UT6 975 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 MIER1Q8N108 512 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 STAMQ92783 540 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 ZKSCAN3Q9BRR0 538 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 SLC2A4RGQ9NR83 387 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 RNF19AQ9NV58 838 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 RAB23Q9ULC3 237 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
GGA3-212ENST00000582376 FRMPD4Q14CM0 1322 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 KANSL1LA0AUZ9 987 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 NT5C1B-RDH14C9J2C7 533 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 ZBTB5O15062 677 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 LRP3O75074 770 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 FGAP02671 866 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 PCP11498 1178 aaKnown RBP10.61□□□□□ -0.71
GGA3-212ENST00000582376 MAGEA9P43362 315 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 ALDH7A1P49419 539 aaKnown RBP10.61□□□□□ -0.71
GGA3-212ENST00000582376 POLGP54098 1239 aaPredicted RBP10.61□□□□□ -0.71
GGA3-212ENST00000582376 CCDC178Q5BJE1 867 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 TRAPPC12Q8WVT3 735 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 TMEM40Q8WWA1 233 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 ESR2Q92731 530 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 NELL1Q92832 810 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 MYADMQ96S97 322 aa10.61□□□□□ -0.71
GGA3-212ENST00000582376 WDR6Q9NNW5 1121 aaKnown RBP10.61□□□□□ -0.71
GGA3-212ENST00000582376 ANKRD11Q6UB99 2663 aaPredicted RBP10.61□□□□□ -0.71
GGA3-212ENST00000582376 CLUHO75153 1309 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 C2orf16Q68DN1 1984 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 BCAR1P56945 870 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 HAND2P61296 217 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 TRAF1Q13077 416 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 DSC3Q14574 896 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 UBXN2BQ14CS0 331 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 LAIR1Q6GTX8 287 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 MTHFD1LQ6UB35 978 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 DDX53Q86TM3 631 aaKnown RBP10.6□□□□□ -0.71
GGA3-212ENST00000582376 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 CMASQ8NFW8 434 aaPredicted RBP10.6□□□□□ -0.71
GGA3-212ENST00000582376 MTMR8Q96EF0 704 aa10.6□□□□□ -0.71
GGA3-212ENST00000582376 CDHR5Q9HBB8 845 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms