RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 FXR1P51114 621 aaKnown RBP eCLIP16.12■□□□□ 0.17
MKS1-211ENST00000581761 ACTR2P61160 394 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 MAPK7Q13164 816 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 ADAM9Q13443 819 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 KCTD2Q14681 263 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 SYCP1Q15431 976 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 ODR4Q5SWX8 454 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 MAEAQ7L5Y9 396 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 TIPINQ9BVW5 301 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 NDST4Q9H3R1 872 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 MROH8Q9H579 483 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 TRMT1Q9NXH9 659 aaKnown RBP16.12■□□□□ 0.17
MKS1-211ENST00000581761 CPA4Q9UI42 421 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 TRAF3IP3Q9Y228 551 aa16.12■□□□□ 0.17
MKS1-211ENST00000581761 TMEM150BA6NC51 233 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 CCP110O43303 1012 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 STX10O60499 249 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 SUPT20HL2P0C7V6 817 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 NR2F2P24468 414 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 ERVK-9P63128 1117 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 ERVK-24P63145 666 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 UTP14CQ5TAP6 766 aaKnown RBP16.11■□□□□ 0.17
MKS1-211ENST00000581761 E4F1Q66K89 784 aaPredicted RBP16.11■□□□□ 0.17
MKS1-211ENST00000581761 PLA2G4FQ68DD2 849 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 SWSAP1Q6NVH7 229 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 OTUD6AQ7L8S5 288 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 DAW1Q8N136 415 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 ERGIC2Q96RQ1 377 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 PARK7Q99497 189 aaKnown RBP16.11■□□□□ 0.17
MKS1-211ENST00000581761 NUP58Q9BVL2 599 aa16.11■□□□□ 0.17
MKS1-211ENST00000581761 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
MKS1-211ENST00000581761 K7ENM7 598 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 NKRFO15226 690 aaKnown RBP eCLIP16.1■□□□□ 0.17
MKS1-211ENST00000581761 PGK2P07205 417 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 ZC2HC1CQ53FD0 456 aaPredicted RBP16.1■□□□□ 0.17
MKS1-211ENST00000581761 ABHD15Q6UXT9 468 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 ZNF720Q7Z2F6 126 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
MKS1-211ENST00000581761 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
MKS1-211ENST00000581761 C16orf45Q96MC5 204 aaPredicted RBP16.1■□□□□ 0.17
MKS1-211ENST00000581761 FIZ1Q96SL8 496 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 SH2D3AQ9BRG2 576 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 R3HCC1Q9Y3T6 440 aaKnown RBP16.1■□□□□ 0.17
MKS1-211ENST00000581761 TELO2Q9Y4R8 837 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 PCDHB13Q9Y5F0 798 aa16.1■□□□□ 0.17
MKS1-211ENST00000581761 NR3C1P04150 777 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 MAPTP10636 758 aaKnown RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 PLS3P13797 630 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 UBA1P22314 1058 aaKnown RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 CTGFP29279 349 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 KRT9P35527 623 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 KLK7P49862 253 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 NPEPPSP55786 919 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 MARSP56192 900 aaKnown RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 CCNA1P78396 465 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 SP2Q02086 613 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 SP3Q02447 781 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 FAM102BQ5T8I3 360 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 CCDC60Q8IWA6 550 aaPredicted RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 CD99L2Q8TCZ2 262 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 PPP1R13BQ96KQ4 1090 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 DRC1Q96MC2 740 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 ARHGAP39Q9C0H5 1083 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 ABHD10Q9NUJ1 306 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 LARSQ9P2J5 1176 aaKnown RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 LUC7L2Q9Y383 392 aaKnown RBP16.09■□□□□ 0.17
MKS1-211ENST00000581761 ZMYM2Q9UBW7 1377 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 HTTP42858 3142 aa16.09■□□□□ 0.17
MKS1-211ENST00000581761 DOCK5Q9H7D0 1870 aa16.08■□□□□ 0.17
MKS1-211ENST00000581761 TTC26A0AVF1 554 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 RNF225M0QZC1 329 aaPredicted RBP16.08■□□□□ 0.16
MKS1-211ENST00000581761 CLIC2O15247 247 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 SLC16A3O15427 465 aaKnown RBP16.08■□□□□ 0.16
MKS1-211ENST00000581761 ZSCAN12O43309 604 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 ZNF862O60290 1169 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 STBD1O95210 358 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 EPB41P11171 864 aaKnown RBP16.08■□□□□ 0.16
MKS1-211ENST00000581761 TNNT1P13805 278 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 PRKCEQ02156 737 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 KCNA1Q09470 495 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 ALCAMQ13740 583 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 NEDD9Q14511 834 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 PKN2Q16513 984 aaKnown RBP16.08■□□□□ 0.16
MKS1-211ENST00000581761 ANO5Q75V66 913 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 FRMD5Q7Z6J6 570 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 KSR1Q8IVT5 923 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 TRIM59Q8IWR1 403 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 RETREG2Q8NC44 543 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 IQCDQ96DY2 449 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 CEP170P1Q96L14 293 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 FGD4Q96M96 766 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 EFCC1Q9HA90 598 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 ZNF302Q9NR11 478 aa16.08■□□□□ 0.16
MKS1-211ENST00000581761 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
MKS1-211ENST00000581761 CAPN11Q9UMQ6 739 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms