RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SCNN1GP51170 649 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 ZC3H6P61129 1189 aaKnown RBP5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 GUCY1A3Q02108 690 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 Q6ZRM9 215 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 ASB1Q9Y576 335 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 PCDHA9Q9Y5H5 950 aa5.61□□□□□ -1.51
SMCHD1-206ENST00000581631 NAT1P18440 290 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 ADRA1BP35368 520 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 ADCY7P51828 1080 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 TOB2Q14106 344 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 ZBTB38Q8NAP3 1195 aaPredicted RBP5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 VOPP1Q96AW1 172 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 CRAMP1Q96RY5 1269 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 VWA7Q9Y334 891 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 B3GALT1Q9Y5Z6 326 aa5.6□□□□□ -1.51
SMCHD1-206ENST00000581631 GOLGA6L22H0YM25 854 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 RAMP2O60895 175 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 CRTAMO95727 393 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 FBLP22087 321 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 PROZP22891 400 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 STAT3P40763 770 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 GABREP78334 506 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 ADAM15Q13444 863 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 FAM47CQ5HY64 1035 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 GBP4Q96PP9 640 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 KCNH7Q9NS40 1196 aa5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 REXO2Q9Y3B8 237 aaKnown RBP5.59□□□□□ -1.51
SMCHD1-206ENST00000581631 PRAMEF22A3QJZ6 481 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 SCDO00767 359 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 GSTA4O15217 222 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 FOXP2O15409 715 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 DNM2P50570 870 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 RASGRF1Q13972 1273 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 CATSPEREQ5SY80 951 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 HTR3DQ70Z44 454 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 RHOUQ7L0Q8 258 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 MRGPREQ86SM8 312 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 RTN4RL1Q86UN2 441 aaPredicted RBP5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 ANKRD35Q8N283 1001 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 CISD2Q8N5K1 135 aaKnown RBP5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 LPPQ93052 612 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 MIEF2Q96C03 454 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 FOXRED1Q96CU9 486 aaPredicted RBP5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 GPHA2Q96T91 129 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 TTPALQ9BTX7 342 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 FAM184BQ9ULE4 1060 aa5.58□□□□□ -1.52
SMCHD1-206ENST00000581631 A0A1W2PRX2 142 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 PDPK1O15530 556 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 APEX1P27695 318 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 ATP2C1P98194 919 aaPredicted RBP5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 CRHR2Q13324 411 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 ACAP1Q15027 740 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 EP400NLQ6ZTU2 488 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 OVCH1Q7RTY7 1134 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 GSTCDQ8NEC7 633 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 CELF4Q9BZC1 486 aaKnown RBP5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 SLC6A15Q9H2J7 730 aa5.57□□□□□ -1.52
SMCHD1-206ENST00000581631 KLRG2A4D1S0 409 aaPredicted RBP5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 C2orf78A6NCI8 922 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 DIAPH1O60610 1272 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 PPFIA2O75334 1257 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 RABGGTBP53611 331 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 ALDH6A1Q02252 535 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 C1QL3Q5VWW1 255 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 DPY19L2P1Q6NXN4 242 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 KLHDC10Q6PID8 442 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 ZC3H7AQ8IWR0 971 aaKnown RBP5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 NKD2Q969F2 451 aaPredicted RBP5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 SLC7A6OSQ96CW6 309 aaPredicted RBP5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 CDC6Q99741 560 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 SLC52A2Q9HAB3 445 aa5.56□□□□□ -1.52
SMCHD1-206ENST00000581631 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 TRAF5O00463 557 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 FAM153BP0C7A2 387 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 LAIR1Q6GTX8 287 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 HIPK4Q8NE63 616 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 WDR48Q8TAF3 677 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 FOXB1Q99853 325 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 DHRS4Q9BTZ2 278 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 TRPS1Q9UHF7 1281 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 PFDN2Q9UHV9 154 aa5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 MRPS23Q9Y3D9 190 aaKnown RBP5.55□□□□□ -1.52
SMCHD1-206ENST00000581631 XDHP47989 1333 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 TMEM191CA6NGB0 347 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 GRXCR1A8MXD5 290 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 RPS6KA4O75676 772 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 RASGRP1O95267 797 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 KCNA6P17658 529 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 MAN2A2P49641 1150 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 ANTXR2P58335 489 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 TRIM61Q5EBN2 209 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 LENG9Q96B70 501 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 CCDC113Q9H0I3 377 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 COQ6Q9Y2Z9 468 aa5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 CCDC9Q9Y3X0 531 aaKnown RBP5.54□□□□□ -1.52
SMCHD1-206ENST00000581631 ZBTB48P10074 688 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 NR4A1P22736 598 aa5.53□□□□□ -1.52
SMCHD1-206ENST00000581631 SESN2P58004 480 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms