RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 KRT25Q7Z3Z0 450 aa23.6■■□□□ 1.37
CCDC42-203ENST00000581598 AIFM3Q96NN9 605 aa23.6■■□□□ 1.37
CCDC42-203ENST00000581598 SLKQ9H2G2 1235 aaPredicted RBP23.6■■□□□ 1.37
CCDC42-203ENST00000581598 UPF2Q9HAU5 1272 aaKnown RBP23.6■■□□□ 1.37
CCDC42-203ENST00000581598 ST3GAL5Q9UNP4 418 aa23.6■■□□□ 1.37
CCDC42-203ENST00000581598 PFKFB2O60825 505 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 TDP2O95551 362 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 TMOD1P28289 359 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 PRKCEQ02156 737 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 KIZQ2M2Z5 673 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 TCEAL5Q5H9L2 206 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 METTL13Q8N6R0 699 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 NEK9Q8TD19 979 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 PABPC5Q96DU9 382 aaKnown RBP23.59■■□□□ 1.37
CCDC42-203ENST00000581598 PHF20Q9BVI0 1012 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 RAPGEFL1Q9UHV5 662 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 LRFN2Q9ULH4 789 aa23.59■■□□□ 1.37
CCDC42-203ENST00000581598 MRPL42Q9Y6G3 142 aaKnown RBP23.59■■□□□ 1.37
CCDC42-203ENST00000581598 FNDC1Q4ZHG4 1894 aaPredicted RBP23.59■■□□□ 1.37
CCDC42-203ENST00000581598 GRM6O15303 877 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 NCK2O43639 380 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 MGEA5O60502 916 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 MMP1P03956 469 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 ANKRD1Q15327 319 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 EFCAB12Q6NXP0 572 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 SLC24A5Q71RS6 500 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 FAM228AQ86W67 206 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 ETNPPLQ8TBG4 499 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 MAP7D2Q96T17 732 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 OSMRQ99650 979 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 TPCN1Q9ULQ1 816 aa23.58■■□□□ 1.37
CCDC42-203ENST00000581598 C9IYK1 514 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 CHMP2AO43633 222 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 VTNP04004 478 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 XBP1P17861 261 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 KCNA5P22460 613 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
CCDC42-203ENST00000581598 CLCN3P51790 818 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 TARBP2Q15633 366 aaKnown RBP23.57■■□□□ 1.36
CCDC42-203ENST00000581598 UGCGQ16739 394 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 PUS10Q3MIT2 529 aaKnown RBP23.57■■□□□ 1.36
CCDC42-203ENST00000581598 TRMT1LQ7Z2T5 733 aaKnown RBP23.57■■□□□ 1.36
CCDC42-203ENST00000581598 MIER3Q7Z3K6 550 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.57■■□□□ 1.36
CCDC42-203ENST00000581598 TBC1D32Q96NH3 1257 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 ADAM2Q99965 735 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 ADAMTS10Q9H324 1103 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 PCDHB7Q9Y5E2 793 aa23.57■■□□□ 1.36
CCDC42-203ENST00000581598 DENND3A2RUS2 1198 aa23.56■■□□□ 1.36
CCDC42-203ENST00000581598 FAM189BP81408 668 aa23.56■■□□□ 1.36
CCDC42-203ENST00000581598 DSC3Q14574 896 aa23.56■■□□□ 1.36
CCDC42-203ENST00000581598 NIFKQ9BYG3 293 aaKnown RBP23.56■■□□□ 1.36
CCDC42-203ENST00000581598 ELAC1Q9H777 363 aaKnown RBP23.56■■□□□ 1.36
CCDC42-203ENST00000581598 KCNJ14Q9UNX9 436 aa23.56■■□□□ 1.36
CCDC42-203ENST00000581598 PLAGL2Q9UPG8 496 aa23.56■■□□□ 1.36
CCDC42-203ENST00000581598 NLRP11P59045 1033 aaKnown RBP23.55■■□□□ 1.36
CCDC42-203ENST00000581598 INF2Q27J81 1249 aa23.55■■□□□ 1.36
CCDC42-203ENST00000581598 XKR3Q5GH77 459 aa23.55■■□□□ 1.36
CCDC42-203ENST00000581598 PPP4R3AQ6IN85 833 aa23.55■■□□□ 1.36
CCDC42-203ENST00000581598 GJA10Q969M2 543 aa23.55■■□□□ 1.36
CCDC42-203ENST00000581598 DDX25Q9UHL0 483 aaKnown RBP23.55■■□□□ 1.36
CCDC42-203ENST00000581598 AKT3Q9Y243 479 aa23.55■■□□□ 1.36
CCDC42-203ENST00000581598 CCDC194A0A1B0GVG4 234 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 STBD1O95210 358 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 GCFC2P16383 781 aaKnown RBP23.54■■□□□ 1.36
CCDC42-203ENST00000581598 EIF4BP23588 611 aaKnown RBP23.54■■□□□ 1.36
CCDC42-203ENST00000581598 PAN2Q504Q3 1202 aaKnown RBP23.54■■□□□ 1.36
CCDC42-203ENST00000581598 LRRC71Q8N4P6 559 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 FAM20AQ96MK3 541 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 CEP89Q96ST8 783 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 PPP1R16BQ96T49 567 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 TMEM161AQ9NX61 479 aa23.54■■□□□ 1.36
CCDC42-203ENST00000581598 GRXCR2A6NFK2 248 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 CTDNEP1O95476 244 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 ITGB1P05556 798 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 GPC3P51654 580 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 CDC42EP1Q00587 391 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 TBC1D8BQ0IIM8 1120 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 CAMK1Q14012 370 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 CTC1Q2NKJ3 1217 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 PTCRAQ6ISU1 281 aaPredicted RBP23.53■■□□□ 1.36
CCDC42-203ENST00000581598 NEK8Q86SG6 692 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 SPPL3Q8TCT6 385 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 WASF1Q92558 559 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 NAP1L4Q99733 375 aaKnown RBP23.53■■□□□ 1.36
CCDC42-203ENST00000581598 KCNMB3Q9NPA1 279 aa23.53■■□□□ 1.36
CCDC42-203ENST00000581598 IGKV6-21A0A0C4DH24 114 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 SLC37A4O43826 429 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 GATMP50440 423 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 AK2P54819 239 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 PPP2R5CQ13362 524 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 LETM2Q2VYF4 491 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 FAM178BQ8IXR5 827 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 KLHL23Q8NBE8 558 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 ATP6V0A4Q9HBG4 840 aa23.52■■□□□ 1.36
CCDC42-203ENST00000581598 ALG13Q9NP73 1137 aaKnown RBP23.52■■□□□ 1.36
CCDC42-203ENST00000581598 PLXNA4Q9HCM2 1894 aa23.51■■□□□ 1.35
CCDC42-203ENST00000581598 TBX3O15119 743 aa23.51■■□□□ 1.35
CCDC42-203ENST00000581598 DARSP14868 501 aaKnown RBP23.51■■□□□ 1.35
CCDC42-203ENST00000581598 PSMC5P62195 406 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms