RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 TOP1MTQ969P6 601 aa14.14□□□□□ -0.15
SNORD55-201ENST00000581525 FTHL17Q9BXU8 183 aa14.14□□□□□ -0.15
SNORD55-201ENST00000581525 FAM49AQ9H0Q0 323 aaPredicted RBP14.14□□□□□ -0.15
SNORD55-201ENST00000581525 TTYH1Q9H313 450 aaPredicted RBP14.14□□□□□ -0.15
SNORD55-201ENST00000581525 PADI3Q9ULW8 664 aa14.14□□□□□ -0.15
SNORD55-201ENST00000581525 YBX2Q9Y2T7 364 aaKnown RBP14.14□□□□□ -0.15
SNORD55-201ENST00000581525 STK24Q9Y6E0 443 aa14.14□□□□□ -0.15
SNORD55-201ENST00000581525 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
SNORD55-201ENST00000581525 TMEM150BA6NC51 233 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 POTEMA6NI47 508 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 ZBBXA8MT70 800 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 M0QZ92 97 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 GJB5O95377 273 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 PBX2P40425 430 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 RFC5P40937 340 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 TECP42680 631 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 CLCN3P51790 818 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 DEFB103AP81534 67 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 HTRA4P83105 476 aaPredicted RBP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 CTTNQ14247 550 aaKnown RBP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 MTERF2Q49AM1 385 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 ARL6IP4Q66PJ3 421 aaKnown RBP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 MCTP1Q6DN14 999 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 TRMT1LQ7Z2T5 733 aaKnown RBP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 TPH2Q8IWU9 490 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 KCTD17Q8N5Z5 321 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 DEFB123Q8N688 67 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 TMEM40Q8WWA1 233 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 ERVK-5Q9HDB9 667 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 SEPT9Q9UHD8 586 aaPredicted RBP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 MSRAQ9UJ68 235 aa14.13□□□□□ -0.15
SNORD55-201ENST00000581525 DBR1Q9UK59 544 aaKnown RBP14.13□□□□□ -0.15
SNORD55-201ENST00000581525 MED24O75448 989 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 VTNP04004 478 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 EIF4BP23588 611 aaKnown RBP14.12□□□□□ -0.15
SNORD55-201ENST00000581525 CD52P31358 61 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 KCNJ6P48051 423 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 DNM2P50570 870 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 GPC3P51654 580 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 NLRP11P59045 1033 aaKnown RBP14.12□□□□□ -0.15
SNORD55-201ENST00000581525 FAM189BP81408 668 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 POU5F1BQ06416 359 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 DRP2Q13474 957 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 ODR4Q5SWX8 454 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 LRRC71Q8N4P6 559 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 METTL13Q8N6R0 699 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 TIFAQ96CG3 184 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 CEP170P1Q96L14 293 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 NACC1Q96RE7 527 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 MAP7D2Q96T17 732 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 RAD9AQ99638 391 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 TSPYL2Q9H2G4 693 aaPredicted RBP14.12□□□□□ -0.15
SNORD55-201ENST00000581525 TMX1Q9H3N1 280 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 MTMR6Q9Y217 621 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 NOC2LQ9Y3T9 749 aaKnown RBP14.12□□□□□ -0.15
SNORD55-201ENST00000581525 SIP14410 1827 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 COL6A3P12111 3177 aa14.12□□□□□ -0.15
SNORD55-201ENST00000581525 GPR182O15218 404 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 ASAP2O43150 1006 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 BMP15O95972 392 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 RARRES1P49788 294 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 CYP4A11Q02928 519 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 TMEM62Q0P6H9 643 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 RESTQ13127 1097 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 DSC3Q14574 896 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 KIZQ2M2Z5 673 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 TMEM266Q2M3C6 531 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 HYIQ5T013 277 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 ZNF697Q5TEC3 545 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 PLA2G4FQ68DD2 849 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 ZNF410Q86VK4 478 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 FAM228AQ86W67 206 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
SNORD55-201ENST00000581525 LINC01599Q8WXQ3 324 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 EVPLQ92817 2033 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 SH2D3AQ9BRG2 576 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 ZNF576Q9H609 170 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 SUGCTQ9HAC7 445 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 XPNPEP1Q9NQW7 623 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 TRANK1O15050 2925 aa14.11□□□□□ -0.15
SNORD55-201ENST00000581525 SLC26A4O43511 780 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 STX6O43752 255 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 RPS6KA5O75582 802 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 DGAT1O75907 488 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 AMHP03971 560 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 DARSP14868 501 aaKnown RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 RABGGTBP53611 331 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 ECM1Q16610 540 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 XKR9Q5GH70 373 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 DTHD1Q6ZMT9 781 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 Q7L0L9 218 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 ERMNQ8TAM6 284 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 SLC7A3Q8WY07 619 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 ZNF689Q96CS4 500 aaPredicted RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
SNORD55-201ENST00000581525 MMTAG2Q9BU76 263 aaKnown RBP14.1□□□□□ -0.15
SNORD55-201ENST00000581525 RAB34Q9BZG1 259 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms