RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
SUPT4H1-206ENST00000581204 TMEM39AQ9NV64 488 aa9.54□□□□□ -0.88
SUPT4H1-206ENST00000581204 PPP1R9AQ9ULJ8 1098 aa9.54□□□□□ -0.88
SUPT4H1-206ENST00000581204 MRPL11Q9Y3B7 192 aaKnown RBP9.54□□□□□ -0.88
SUPT4H1-206ENST00000581204 ABCB11O95342 1321 aa9.54□□□□□ -0.88
SUPT4H1-206ENST00000581204 A0A1W2PQ45 241 aaPredicted RBP9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 A0A1W2PQY0 241 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 EPOPA6NHQ4 379 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 SLC15A5A6NIM6 579 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 RGS20O76081 388 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 UPP2O95045 317 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 ICAM1P05362 532 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 MCM7P33993 719 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 CENPCQ03188 943 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 PTPAQ15257 358 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 TEAD4Q15561 434 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 ALKBH2Q6NS38 261 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 CAVIN1Q6NZI2 390 aaKnown RBP9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 USP17L6PQ6QN14 398 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 CATSPERGQ6ZRH7 1159 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 CCDC73Q6ZRK6 1079 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 NEK8Q86SG6 692 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 CCAR1Q8IX12 1150 aaKnown RBP9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 KDF1Q8NAX2 398 aaPredicted RBP9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 MYO19Q96H55 970 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 PGBD1Q96JS3 809 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 PAGR1Q9BTK6 254 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 SLC28A3Q9HAS3 691 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 RAVER2Q9HCJ3 691 aaKnown RBP9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 HOXC10Q9NYD6 342 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 MSRAQ9UJ68 235 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 DCTN4Q9UJW0 460 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 PCDHA7Q9UN72 937 aa9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 PRRC2BQ5JSZ5 2229 aaKnown RBP9.53□□□□□ -0.88
SUPT4H1-206ENST00000581204 PARP14Q460N5 1801 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 SMCHD1A6NHR9 2005 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 SPDYE3A6NKU9 549 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 GCOM1H8Y6P7 765 aaPredicted RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 RFXAPO00287 272 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 VWA5AO00534 786 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 CCNT1O60563 726 aaKnown RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 CUTAO60888 179 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 CFBP00751 764 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 FOSP01100 380 aaPredicted RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 POLR2MP0CAP2 368 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 ACRP10323 421 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 ALAS1P13196 640 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 MYOGP15173 224 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 CSF2RAP15509 400 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 SMPD1P17405 629 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 TAL1P17542 331 aaPredicted RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 RELBQ01201 579 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 AP3B2Q13367 1082 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 PPIGQ13427 754 aaKnown RBP eCLIP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 NAA30Q147X3 362 aaPredicted RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 LETM2Q2VYF4 491 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 OLFML2BQ68BL8 750 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 ADALQ6DHV7 355 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 DNAJC14Q6Y2X3 702 aaPredicted RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 ZNF365Q70YC5 407 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 MCF2L2Q86YR7 1114 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 TBCKQ8TEA7 893 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 ATG4CQ96DT6 458 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 AGBL1Q96MI9 1066 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 TOX2Q96NM4 488 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 UIMC1Q96RL1 719 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 NIFKQ9BYG3 293 aaKnown RBP9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 EHMT1Q9H9B1 1298 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 SLC38A10Q9HBR0 1119 aa9.52□□□□□ -0.89
SUPT4H1-206ENST00000581204 COL4A4P53420 1690 aaPredicted RBP9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 MYO15AQ9UKN7 3530 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 A0A1W2PQ27 194 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 A0A1W2PQ64 194 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 A0A1W2PQD8 194 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 HOXA13P31271 388 aaPredicted RBP9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 RABGGTBP53611 331 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 OAZ1P54368 228 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 PLS1Q14651 629 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 GNASQ5JWF2 1037 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 TMEM214Q6NUQ4 689 aaKnown RBP9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 FCHSD1Q86WN1 690 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 TEX2Q8IWB9 1127 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 PRSS33Q8NF86 280 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 MRPS27Q92552 414 aaKnown RBP9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 NAP1L4Q99733 375 aaKnown RBP9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 ANO3Q9BYT9 981 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 ZNF232Q9UNY5 417 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 ZNF536O15090 1300 aa9.51□□□□□ -0.89
SUPT4H1-206ENST00000581204 MYH7BA7E2Y1 1941 aa9.5□□□□□ -0.89
SUPT4H1-206ENST00000581204 LAD1O00515 517 aa9.5□□□□□ -0.89
SUPT4H1-206ENST00000581204 MEIS2O14770 477 aa9.5□□□□□ -0.89
SUPT4H1-206ENST00000581204 MARCH6O60337 910 aa9.5□□□□□ -0.89
SUPT4H1-206ENST00000581204 LIG1P18858 919 aa9.5□□□□□ -0.89
SUPT4H1-206ENST00000581204 CMA1P23946 247 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms