RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RPLP2P05387 115 aaKnown RBP11.07□□□□□ -0.64
GGA3-209ENST00000580646 TECP42680 631 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 QARSP47897 775 aaKnown RBP11.07□□□□□ -0.64
GGA3-209ENST00000580646 TAP1Q03518 808 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 SLC39A14Q15043 492 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 MARCH8Q5T0T0 291 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 HAUS3Q68CZ6 603 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 NCAPH2Q6IBW4 605 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
GGA3-209ENST00000580646 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 TMCO2Q7Z6W1 182 aaPredicted RBP11.07□□□□□ -0.64
GGA3-209ENST00000580646 RSPH3Q86UC2 560 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 C4orf19Q8IY42 314 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 ERMNQ8TAM6 284 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 USP28Q96RU2 1077 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 POLR3CQ9BUI4 534 aaPredicted RBP11.07□□□□□ -0.64
GGA3-209ENST00000580646 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 TUFT1Q9NNX1 390 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 CFAP45Q9UL16 551 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 CLIC4Q9Y696 253 aa11.07□□□□□ -0.64
GGA3-209ENST00000580646 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 POTEMA6NI47 508 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 PPP6R2O75170 966 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 ARHGEF15O94989 841 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 CHRNA1P02708 482 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 OATP04181 439 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 XRCC6P12956 609 aaKnown RBP eCLIP11.06□□□□□ -0.64
GGA3-209ENST00000580646 ATP4AP20648 1035 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 IGFBP4P22692 258 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 RPA1P27694 616 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 LONP1P36776 959 aaKnown RBP11.06□□□□□ -0.64
GGA3-209ENST00000580646 PRKCEQ02156 737 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
GGA3-209ENST00000580646 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 ZNF484Q5JVG2 852 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 FAM173BQ6P4H8 233 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 DNAJB3Q8WWF6 145 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 RAD9AQ99638 391 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 EIF2AK1Q9BQI3 630 aaKnown RBP11.06□□□□□ -0.64
GGA3-209ENST00000580646 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
GGA3-209ENST00000580646 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 NRBP2Q9NSY0 501 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 LRWD1Q9UFC0 647 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 SIP14410 1827 aa11.06□□□□□ -0.64
GGA3-209ENST00000580646 MYH11P35749 1972 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 RFXAPO00287 272 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 ZNF862O60290 1169 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 SLITRK3O94933 977 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 STBD1O95210 358 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 AMHP03971 560 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 MGAT3Q09327 533 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 IL17AQ16552 155 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 UGCGQ16739 394 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 HYIQ5T013 277 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 FAM117BQ6P1L5 589 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 EXOC8Q8IYI6 725 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 MYOCDQ8IZQ8 938 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 USP38Q8NB14 1042 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 LINC00301Q8NCQ3 95 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 BANK1Q8NDB2 785 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 PPM1EQ8WY54 764 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 ARNTL2Q8WYA1 636 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 APBB2Q92870 758 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 LXNQ9BS40 222 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 IFIH1Q9BYX4 1025 aaKnown RBP11.05□□□□□ -0.64
GGA3-209ENST00000580646 FAM49AQ9H0Q0 323 aaPredicted RBP11.05□□□□□ -0.64
GGA3-209ENST00000580646 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 SRPRBQ9Y5M8 271 aaKnown RBP11.05□□□□□ -0.64
GGA3-209ENST00000580646 CHD9Q3L8U1 2897 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
GGA3-209ENST00000580646 MYO9BQ13459 2157 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 SMIM35A0A1B0GVV1 85 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 SPATA31C1P0DKV0 1188 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 GHRP10912 638 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 KRT85P78386 507 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 MRPS6P82932 125 aaKnown RBP11.04□□□□□ -0.64
GGA3-209ENST00000580646 LPIN1Q14693 890 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 TARBP2Q15633 366 aaKnown RBP11.04□□□□□ -0.64
GGA3-209ENST00000580646 FBXO47Q5MNV8 452 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 IER5Q5VY09 327 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 KRT79Q5XKE5 535 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 OTUD6AQ7L8S5 288 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 CATSPER3Q86XQ3 398 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 CKAP2LQ8IYA6 745 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 KCNG4Q8TDN1 519 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 IPO9Q96P70 1041 aaKnown RBP11.04□□□□□ -0.64
GGA3-209ENST00000580646 NT5C3AQ9H0P0 336 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 ANKEF1Q9NU02 776 aa11.04□□□□□ -0.64
GGA3-209ENST00000580646 FBXO2Q9UK22 296 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms