RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 OTUD6AQ7L8S5 288 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 DRC1Q96MC2 740 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 PCYT2Q99447 389 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 BAG1Q99933 345 aaPredicted RBP16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TIPINQ9BVW5 301 aa16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.21
CDK5RAP3-218ENST00000580391 TGFB3P10600 412 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ZNF157P51786 506 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SOX10P56693 466 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ZNF792Q3KQV3 632 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 FKBP15Q5T1M5 1219 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 METTL7BQ6UX53 244 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 STXBP4Q6ZWJ1 553 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ARMCX2Q7L311 632 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CNGA4Q8IV77 575 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TRIM59Q8IWR1 403 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PANX2Q96RD6 677 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ERGIC2Q96RQ1 377 aa16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SIP14410 1827 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 IGKV6D-21A0A0A0MT36 114 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 RASSF10A6NK89 507 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 IGF2BP3O00425 579 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GNA14O95837 355 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 OATP04181 439 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TPM1P09493 284 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PEX3P56589 373 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 FAM110CQ1W6H9 321 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 XKR3Q5GH77 459 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TTYH3Q9C0H2 523 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 XPNPEP1Q9NQW7 623 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CYP26B1Q9NR63 512 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PCDHB13Q9Y5F0 798 aa16.32■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TTC26A0AVF1 554 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ASB14A6NK59 587 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 AKAP3O75969 853 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KCNJ6P48051 423 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CASP4P49662 377 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CCDC155Q8N6L0 562 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 COPS5Q92905 334 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 MLXIPQ9HAP2 919 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PDGFCQ9NRA1 345 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ABHD10Q9NUJ1 306 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TRMT1Q9NXH9 659 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 LOC102724159A0A0B4J2E5 919 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SLC16A4O15374 487 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ARHGAP6O43182 974 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 OFD1O75665 1012 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TCF7P36402 384 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 NCKAP1LP55160 1127 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PWP2Q15269 919 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CCDC62Q6P9F0 684 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SAPCD2Q86UD0 394 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 BSNDQ8WZ55 320 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SIK3Q9Y2K2 1263 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ADGRA2Q96PE1 1338 aa16.31■□□□□ 0.2
CDK5RAP3-218ENST00000580391 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 STX10O60499 249 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 DGAT1O75907 488 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KRT9P35527 623 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CELF3Q5SZQ8 465 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KCNV1Q6PIU1 500 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ABRAQ8N0Z2 381 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 C16orf45Q96MC5 204 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 KIFC3Q9BVG8 833 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GBP3Q9H0R5 595 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ATP6V0A4Q9HBG4 840 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PDLIM7Q9NR12 457 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.3■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PASKQ96RG2 1323 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SOWAHDA6NJG2 315 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TISP43B9A030 160 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SLC16A3O15427 465 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 RPL13P26373 211 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 ALCAMQ13740 583 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GRB14Q14449 540 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 NFIL3Q16649 462 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 HAUS6Q7Z4H7 955 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TRIM50Q86XT4 487 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 SEPT1Q8WYJ6 367 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 CCDC51Q96ER9 411 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 GPR20Q99678 358 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 EPHB6O15197 1021 aa16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-218ENST00000580391 FECHP22830 423 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms