RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.58
TOP3A-209ENST00000580095 NUCKS1Q9H1E3 243 aaKnown RBP11.46□□□□□ -0.58
TOP3A-209ENST00000580095 PCIF1Q9H4Z3 704 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 CEP83Q9Y592 693 aa11.46□□□□□ -0.58
TOP3A-209ENST00000580095 FOCADQ5VW36 1801 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 PDXKO00764 312 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 EYA4O95677 639 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 FOSP01100 380 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 ITGA4P13612 1032 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 CBWD6Q4V339 395 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 CBWD3Q5JTY5 395 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 CBWD5Q5RIA9 395 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 FAM186BQ8IYM0 893 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 ZSWIM2Q8NEG5 633 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 CASKIN2Q8WXE0 1202 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 INPP4AQ96PE3 977 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 TYW1Q9NV66 732 aaKnown RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 PCDHGC5Q9Y5F6 944 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 ZMYM2Q9UBW7 1377 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 DDX3XO00571 662 aaKnown RBP eCLIP11.45□□□□□ -0.584e-11■□□□□ 10.2
TOP3A-209ENST00000580095 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 RXRBP28702 533 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 COPB2P35606 906 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 ODR4Q5SWX8 454 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 GBP6Q6ZN66 633 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 PALB2Q86YC2 1186 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 MSL3Q8N5Y2 521 aaKnown RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 FAM76AQ8TAV0 307 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 DDX47Q9H0S4 455 aaKnown RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 UNC45AQ9H3U1 944 aa11.45□□□□□ -0.58
TOP3A-209ENST00000580095 LUC7LQ9NQ29 371 aaKnown RBP11.45□□□□□ -0.58
TOP3A-209ENST00000580095 GCOM1H8Y6P7 765 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-209ENST00000580095 TBX3O15119 743 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 POLR2MP0CAP2 368 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
TOP3A-209ENST00000580095 TTMPQ5BVD1 217 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 MUM1L1Q5H9M0 696 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 MOXD1Q6UVY6 613 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 C1orf186Q6ZWK4 172 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-209ENST00000580095 CPXCR1Q8N123 301 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 TAF4BQ92750 862 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 ZIM3Q96PE6 472 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF577Q9BSK1 485 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 CENPHQ9H3R5 247 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 EVI5O60447 810 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 PSMD10O75832 226 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 CIITAP33076 1130 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 EPHB4P54760 987 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 IL31RAQ8NI17 732 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 PARVGQ9HBI0 331 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 ZNF277Q9NRM2 450 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-209ENST00000580095 TAS2R14Q9NYV8 317 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 SIPA1L1O43166 1804 aa11.44□□□□□ -0.58
TOP3A-209ENST00000580095 RPL13P26373 211 aaKnown RBP11.43□□□□□ -0.58
TOP3A-209ENST00000580095 DLG4P78352 724 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 FOXR2Q6PJQ5 311 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 METTL13Q8N6R0 699 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 OR2W6PQ8NHA6 318 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 RUFY1Q96T51 708 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 LXNQ9BS40 222 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 RRP15Q9Y3B9 282 aaKnown RBP11.43□□□□□ -0.58
TOP3A-209ENST00000580095 TNS1Q9HBL0 1735 aaKnown RBP11.43□□□□□ -0.58
TOP3A-209ENST00000580095 IGSF9BQ9UPX0 1349 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 SHTN1A0MZ66 631 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 DRAP1Q14919 205 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-209ENST00000580095 CEP55Q53EZ4 464 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 SYCP3Q8IZU3 236 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 LNX1Q8TBB1 728 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-209ENST00000580095 POLR3CQ9BUI4 534 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-209ENST00000580095 TRIM31Q9BZY9 425 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 ACP6Q9NPH0 428 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 SAMM50Q9Y512 469 aa11.43□□□□□ -0.58
TOP3A-209ENST00000580095 MYO1CO00159 1063 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 HSF2BPO75031 334 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 KIF4AO95239 1232 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 CCDC172P0C7W6 258 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 GALCP54803 685 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ITIH3Q06033 890 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 PRPF4BQ13523 1007 aaKnown RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 IFT20Q8IY31 132 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 CEP120Q8N960 986 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 TPCN2Q8NHX9 752 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 FAM84AQ96KN4 292 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 FIZ1Q96SL8 496 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 CELF4Q9BZC1 486 aaKnown RBP11.42□□□□□ -0.58
TOP3A-209ENST00000580095 ARHGEF10LQ9HCE6 1279 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 PLCB1Q9NQ66 1216 aa11.42□□□□□ -0.58
TOP3A-209ENST00000580095 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms