RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CWH43Q9H720 699 aa13.93□□□□□ -0.18
CDK5RAP3-216ENST00000579853 PCDHA6Q9UN73 950 aa13.93□□□□□ -0.18
CDK5RAP3-216ENST00000579853 PCDHA8Q9Y5H6 950 aa13.93□□□□□ -0.18
CDK5RAP3-216ENST00000579853 EVPLQ92817 2033 aa13.93□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CARNS1A5YM72 827 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 HIDE1A8MVS5 230 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ATG7O95352 703 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 BRD1O95696 1058 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CALM1P0DP23 149 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CALM2P0DP24 149 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CALM3P0DP25 149 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CLCN5P51795 746 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ZNF484Q5JVG2 852 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CASC1Q6TDU7 716 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 KCNT2Q6UVM3 1135 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ABI1Q8IZP0 508 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ZNF710Q8N1W2 664 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 LRRC43Q8N309 656 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 MFSD1Q9H3U5 465 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 SPG21Q9NZD8 308 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 USTQ9Y2C2 406 aa13.92□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ACACBO00763 2458 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 C2CD4DB7Z1M9 353 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 BACH1O14867 736 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 FOSP01100 380 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 SP100P23497 879 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 APOBRQ0VD83 1088 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 UBE2SQ16763 222 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CEP55Q53EZ4 464 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ZDHHC14Q8IZN3 488 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 TMEM105Q8N8V8 129 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 MRPL43Q8N983 215 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 IL25Q9H293 177 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 LY9Q9HBG7 655 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 HCFC2Q9Y5Z7 792 aa13.91□□□□□ -0.18
CDK5RAP3-216ENST00000579853 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CCDC69A6NI79 296 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 FGFR1P11362 822 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ZSCAN20P17040 1043 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ID4P47928 161 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ANTXR2P58335 489 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 ATAT1Q5SQI0 421 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 SRBD1Q8N5C6 995 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 TDRD5Q8NAT2 981 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 TMEM87AQ8NBN3 555 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 TMEM40Q8WWA1 233 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 POMKQ9H5K3 350 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 DZANK1Q9NVP4 752 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 SSUH2Q9Y2M2 353 aa13.9□□□□□ -0.18
CDK5RAP3-216ENST00000579853 OTOGLQ3ZCN5 2332 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 DSC3Q14574 896 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 KIZQ2M2Z5 673 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 POTEHQ6S545 545 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ABHD15Q6UXT9 468 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 FRMD5Q7Z6J6 570 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CASD1Q96PB1 797 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MRPL9Q9BYD2 267 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 GLT8D2Q9H1C3 349 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ZNF302Q9NR11 478 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 HCSTQ9UBK5 93 aa13.89□□□□□ -0.19
CDK5RAP3-216ENST00000579853 SPTBN2O15020 2390 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 C2orf71A6NGG8 1288 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MEIS1O00470 390 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ARP10275 920 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MCM5P33992 734 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ALDH7A1P49419 539 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PTH1RQ03431 593 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ITGB3BPQ13352 177 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 GIT2Q14161 759 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 KIAA1841Q6NSI8 718 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MIS18BP1Q6P0N0 1132 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PDXDC2PQ6P474 469 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 NIPA1Q7RTP0 329 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 HEATR3Q7Z4Q2 680 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CYP2W1Q8TAV3 490 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 ACSF2Q96CM8 615 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 OSMRQ99650 979 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 AGO4Q9HCK5 861 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CEP131Q9UPN4 1083 aa13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MYH9P35579 1960 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-216ENST00000579853 MAGEB2O15479 319 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 PRC1O43663 620 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 GPR32O75388 356 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 C22orf31O95567 290 aa13.87□□□□□ -0.19
CDK5RAP3-216ENST00000579853 EOMESO95936 686 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms