RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ITGB5P18084 799 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 SDHBP21912 280 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 PBX3P40426 434 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 DSC3Q14574 896 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 GRM4Q14833 912 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 PLCB4Q15147 1175 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 MTHFD1LQ6UB35 978 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 SLC39A11Q8N1S5 342 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 DCLK2Q8N568 766 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 SUMF1Q8NBK3 374 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 IGSF9Q9P2J2 1179 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 IRAK3Q9Y616 596 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 CACNA1IQ9P0X4 2223 aa15.9■□□□□ 0.14
CSNK1D-211ENST00000579316 SP9P0CG40 484 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 TBC1D8BQ0IIM8 1120 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 ST3GAL2Q16842 350 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 KANK3Q6NY19 840 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 CCDC149Q6ZUS6 474 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 PLPPR4Q7Z2D5 763 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 SLC22A17Q8WUG5 538 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 KRT23Q9C075 422 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 AZI2Q9H6S1 392 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 CDHR5Q9HBB8 845 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 DLGAP2Q9P1A6 1054 aa15.89■□□□□ 0.13
CSNK1D-211ENST00000579316 KRBA1A5PL33 1030 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 MEIS2O14770 477 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 EPCAMP16422 314 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 USP17L6PQ6QN14 398 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 GPR149Q86SP6 731 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 KIAA0319LQ8IZA0 1049 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 SMARCC2Q8TAQ2 1214 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 RIN2Q8WYP3 895 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 CNNM2Q9H8M5 875 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 JPH1Q9HDC5 661 aaPredicted RBP15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 UBIAD1Q9Y5Z9 338 aa15.88■□□□□ 0.13
CSNK1D-211ENST00000579316 MAFGO15525 162 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 PDE1AP54750 535 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 MTMR1Q13613 665 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 BMS1Q14692 1282 aaKnown RBP15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 KIAA0319Q5VV43 1072 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 FAM228AQ86W67 206 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 FEZF2Q8TBJ5 459 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 CUL5Q93034 780 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 BORCS6Q96GS4 357 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 ZBP1Q9H171 429 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 SFXN1Q9H9B4 322 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 GINS2Q9Y248 185 aa15.87■□□□□ 0.13
CSNK1D-211ENST00000579316 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 NARSO43776 548 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 CXCL14O95715 111 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 SLC26A2P50443 739 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 CRYBB1P53674 252 aaPredicted RBP15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 ATXN1P54253 815 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 GIT2Q14161 759 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 PHLDB3Q6NSJ2 640 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 TMC5Q6UXY8 1006 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 CABP7Q86V35 215 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 C1orf210Q8IVY1 113 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 ABI1Q8IZP0 508 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 TBC1D17Q9HA65 648 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 SLC9A2Q9UBY0 812 aa15.86■□□□□ 0.13
CSNK1D-211ENST00000579316 KLRC1P26715 233 aa15.85■□□□□ 0.13
CSNK1D-211ENST00000579316 STAT5BP51692 787 aa15.85■□□□□ 0.13
CSNK1D-211ENST00000579316 POLGP54098 1239 aaPredicted RBP15.85■□□□□ 0.13
CSNK1D-211ENST00000579316 CLLU1OSQ5K130 101 aa15.85■□□□□ 0.13
CSNK1D-211ENST00000579316 JADE2Q9NQC1 790 aa15.85■□□□□ 0.13
CSNK1D-211ENST00000579316 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
CSNK1D-211ENST00000579316 C2orf16Q68DN1 1984 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 STK25O00506 426 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 KINO60870 393 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 CFHP08603 1231 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 CTSAP10619 480 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 RFX1P22670 979 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 ACTR2P61160 394 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 TROAPQ12815 778 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 IMMTQ16891 758 aaKnown RBP15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 C15orf39Q6ZRI6 1047 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 PPFIBP1Q86W92 1011 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 VPS52Q8N1B4 723 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 TMEM169Q96HH4 297 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 NFASCO94856 1347 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 COL1A2P08123 1366 aa15.84■□□□□ 0.13
CSNK1D-211ENST00000579316 PKD1L2Q7Z442 2459 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 PRR5-ARHGAP8B1AHC4 643 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 SPTLC1O15269 473 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 N4BP1O75113 896 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 ADRB1P08588 477 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 SRFP11831 508 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 ALDH7A1P49419 539 aaKnown RBP15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 BCAR1P56945 870 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 ARHGAP8P85298 464 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 NONOQ15233 471 aaKnown RBP eCLIP15.83■□□□□ 0.122e-6■■■□□ 18.4
CSNK1D-211ENST00000579316 ZNF528Q3MIS6 628 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 ECHDC2Q86YB7 292 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 MAML2Q8IZL2 1156 aaPredicted RBP15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 AUTS2Q8WXX7 1259 aa15.83■□□□□ 0.12
CSNK1D-211ENST00000579316 OSMRQ99650 979 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms