RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 IER5Q5VY09 327 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 CCDC73Q6ZRK6 1079 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 KIAA0319LQ8IZA0 1049 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 TCP11Q8WWU5 503 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 MTRQ99707 1265 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 PPP1R12CQ9BZL4 782 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 FAM49AQ9H0Q0 323 aaPredicted RBP17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 BHMT2Q9H2M3 363 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 MYH9P35579 1960 aaKnown RBP17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 MYH15Q9Y2K3 1946 aa17.33■□□□□ 0.36
SLC6A4-205ENST00000579221 GOLGA6L4A6NEF3 574 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 M0QZ92 97 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 PARNO95453 639 aaKnown RBP17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 SELPP16109 830 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 CYP2C18P33260 490 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 CDC42EP1Q00587 391 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 RESP18Q5W5W9 173 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 PADI6Q6TGC4 694 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 KCNK18Q7Z418 384 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 ZNF710Q8N1W2 664 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 LRRC71Q8N4P6 559 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 TMEM199Q8N511 208 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 LINC01465Q8N7H1 131 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 SYT2Q8N9I0 419 aaPredicted RBP17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 WNT8BQ93098 351 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 MAP7D2Q96T17 732 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 ATP6V0A4Q9HBG4 840 aa17.32■□□□□ 0.36
SLC6A4-205ENST00000579221 BRCA2P51587 3418 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 RSPH10B2B2RC85 870 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 USO1O60763 962 aaKnown RBP17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 SSBP05455 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 IQCF3P0C7M6 154 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 PLA2G4BP0C869 781 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 RSPH10BP0C881 870 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 CYP11B2P19099 503 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 CLCN3P51790 818 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 CCL23P55773 120 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 EMC2Q15006 297 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 FAM26DQ5JW98 314 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 MFSD5Q6N075 450 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 LRRC8DQ7L1W4 858 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 RAD54LQ92698 747 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 PYM1Q9BRP8 204 aaKnown RBP17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 SUCLA2Q9P2R7 463 aaPredicted RBP17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 STK17AQ9UEE5 414 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 AKT3Q9Y243 479 aa17.31■□□□□ 0.36
SLC6A4-205ENST00000579221 A0A1W2PQ27 194 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 A0A1W2PQ64 194 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 A0A1W2PQD8 194 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 ASAP2O43150 1006 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 ITGB8P26012 769 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 STAT6P42226 847 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 MRPS6P82932 125 aaKnown RBP17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 PDILTQ8N807 584 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 IQUBQ8NA54 791 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 BADQ92934 168 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 TMEM143Q96AN5 459 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 BLOC1S4Q9NUP1 217 aa17.3■□□□□ 0.36
SLC6A4-205ENST00000579221 UMODL1Q5DID0 1318 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 RFC2P35250 354 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 SLC12A3P55017 1021 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 MCM6Q14566 821 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 TPRNQ4KMQ1 711 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 RINT1Q6NUQ1 792 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 SV2BQ7L1I2 683 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 MAEAQ7L5Y9 396 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 RPUSD2Q8IZ73 545 aaKnown RBP17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 PSPC1Q8WXF1 523 aaKnown RBP17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 LARP4BQ92615 738 aaKnown RBP17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 TIPINQ9BVW5 301 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 CELF4Q9BZC1 486 aaKnown RBP17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 KCND2Q9NZV8 630 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 KCNH3Q9ULD8 1083 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 TRPV2Q9Y5S1 764 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 CDY2AQ9Y6F7 541 aa17.29■□□□□ 0.36
SLC6A4-205ENST00000579221 A0A087X0B3 334 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 A0A1B0GVL5 298 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 H0YGN5 161 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 CHRNA1P02708 482 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 VTNP04004 478 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 CTSHP09668 335 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 CRYBB1P53674 252 aaPredicted RBP17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 NLRP11P59045 1033 aaKnown RBP17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 MGAT3Q09327 533 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 TMEM62Q0P6H9 643 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 PPIGQ13427 754 aaKnown RBP eCLIP17.28■□□□□ 0.369e-6■■□□□ 12.8
SLC6A4-205ENST00000579221 DRP2Q13474 957 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 DHX8Q14562 1220 aaKnown RBP17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 MXD4Q14582 209 aaPredicted RBP17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 FAM102BQ5T8I3 360 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 C1orf186Q6ZWK4 172 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 RHPN2Q8IUC4 686 aa17.28■□□□□ 0.36
SLC6A4-205ENST00000579221 PRPF31Q8WWY3 499 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms