RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 MRE11P49959 708 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 CCT2P78371 535 aaKnown RBP4.37□□□□□ -1.71
NUP85-209ENST00000578987 FUT2Q10981 343 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 COL19A1Q14993 1142 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 SMAD2Q15796 467 aaKnown RBP4.37□□□□□ -1.71
NUP85-209ENST00000578987 RTN1Q16799 776 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 PUS10Q3MIT2 529 aaKnown RBP4.37□□□□□ -1.71
NUP85-209ENST00000578987 LONRF3Q496Y0 759 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 CEP55Q53EZ4 464 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 PLPP4Q5VZY2 271 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 EFCAB12Q6NXP0 572 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 KANK3Q6NY19 840 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 LLGL2Q6P1M3 1020 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 LRRC55Q6ZSA7 311 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 Q6ZUG5 572 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 DHX32Q7L7V1 743 aaKnown RBP4.37□□□□□ -1.71
NUP85-209ENST00000578987 SGMS1Q86VZ5 419 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 NPAS4Q8IUM7 802 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 CMTR2Q8IYT2 770 aaKnown RBP4.37□□□□□ -1.71
NUP85-209ENST00000578987 KIAA0319LQ8IZA0 1049 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 NME8Q8N427 588 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 LRRC71Q8N4P6 559 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 METTL13Q8N6R0 699 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 COLGALT1Q8NBJ5 622 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 VN1R2Q8NFZ6 395 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 RASGRP4Q8TDF6 673 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 P2RX5Q93086 422 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 PHKBQ93100 1093 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 FAM212AQ96EL1 285 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 MSLNLQ96KJ4 702 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 RPGRIP1Q96KN7 1286 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 OSMRQ99650 979 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 SH2D3AQ9BRG2 576 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 MTA3Q9BTC8 594 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 ANO3Q9BYT9 981 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 FAM117AQ9C073 453 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 LMAN2LQ9H0V9 348 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 CWH43Q9H720 699 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 TLE6Q9H808 572 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 ERVK-5Q9HDB9 667 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 ZNF302Q9NR11 478 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 RGS18Q9NS28 235 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 GABBR1Q9UBS5 961 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 PRKAG3Q9UGI9 489 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 CDH22Q9UJ99 828 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 FAM50BQ9Y247 325 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 RWDD3Q9Y3V2 267 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 IGSF9BQ9UPX0 1349 aa4.37□□□□□ -1.71
NUP85-209ENST00000578987 ZNF318Q5VUA4 2279 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 IGLV3-22A0A075B6J6 115 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 DENND3A2RUS2 1198 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 TMEM150BA6NC51 233 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 C9IYK1 514 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 IPO5O00410 1097 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 GPR182O15218 404 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 GPR32O75388 356 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FGF18O76093 207 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FOSP01100 380 aaPredicted RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 CDK11BP21127 795 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 SREBF1P36956 1147 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 TECP42680 631 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 RBM25P49756 843 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 CLCN3P51790 818 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 CRYBB1P53674 252 aaPredicted RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 NLRP11P59045 1033 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 FAM189BP81408 668 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FGD1P98174 961 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 NHLH1Q02575 133 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 SMAD4Q13485 552 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 PKN1Q16512 942 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 PRR16Q569H4 304 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 NAALADL2Q58DX5 795 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 ZNF484Q5JVG2 852 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FAM160B1Q5W0V3 765 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 MIS18BP1Q6P0N0 1132 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FAM228AQ86W67 206 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 THNSL1Q8IYQ7 743 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 EFHBQ8N7U6 833 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 RNF169Q8NCN4 708 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FEZF2Q8TBJ5 459 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 AUTS2Q8WXX7 1259 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 EDAQ92838 391 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 TNPO1Q92973 898 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 PBXIP1Q96AQ6 731 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 ZNF577Q9BSK1 485 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 PLVAPQ9BX97 442 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 FTHL17Q9BXU8 183 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 UPF3BQ9BZI7 483 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 GZF1Q9H116 711 aaPredicted RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 ATP6V0A4Q9HBG4 840 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 RNF19AQ9NV58 838 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 RBM28Q9NW13 759 aaKnown RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 BARHL2Q9NY43 387 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 USP15Q9Y4E8 981 aaPredicted RBP4.36□□□□□ -1.71
NUP85-209ENST00000578987 SAMM50Q9Y512 469 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 PCDHB12Q9Y5F1 795 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 SQORQ9Y6N5 450 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 ARID2Q68CP9 1835 aa4.36□□□□□ -1.71
NUP85-209ENST00000578987 TMEM221A6NGB7 291 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms