RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 IGSF9BQ9UPX0 1349 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 KIAA1217Q5T5P2 1943 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 CHD9Q3L8U1 2897 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM150BA6NC51 233 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ZBTB42B2RXF5 422 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ENPP3O14638 875 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 GJB5O95377 273 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 CD2BP2O95400 341 aaKnown RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 OR52Z1P0C646 297 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ZSCAN20P17040 1043 aaPredicted RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 PDCP20941 246 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 U2AF2P26368 475 aaKnown RBP eCLIP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 NPEPPSP55786 919 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ORC2Q13416 577 aaPredicted RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 TCTN1Q2MV58 587 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 PLA2G4FQ68DD2 849 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ANO5Q75V66 913 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 RHPN2Q8IUC4 686 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 MICALL1Q8N3F8 863 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 SLC17A8Q8NDX2 589 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ZNF668Q96K58 619 aaPredicted RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 OSMRQ99650 979 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 LXNQ9BS40 222 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 GCOM2Q9BZD3 368 aaPredicted RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 OSBPL7Q9BZF2 842 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 RAB34Q9BZG1 259 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 AGO3Q9H9G7 860 aaKnown RBP7.33□□□□□ -1.24
TRAF4-213ENST00000578917 CDHR5Q9HBB8 845 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 CYP26B1Q9NR63 512 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 FOXD4L1Q9NU39 408 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 ST3GAL5Q9UNP4 418 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 STXBP5LQ9Y2K9 1186 aa7.33□□□□□ -1.24
TRAF4-213ENST00000578917 GTPBP6O43824 516 aaPredicted RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 MAFO75444 373 aaPredicted RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 SLITRK3O94933 977 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 SRGAP2CP0DJJ0 459 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 EIF4BP23588 611 aaKnown RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 RFC5P40937 340 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 TAP1Q03518 808 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 NCBP1Q09161 790 aaKnown RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 MGAT3Q09327 533 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 PTGDRQ13258 359 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 ZRSR1Q15695 479 aaKnown RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 CCDC85BQ15834 202 aaPredicted RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 RILPL1Q5EBL4 403 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 B3GNT9Q6UX72 402 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 DTHD1Q6ZMT9 781 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 C4orf19Q8IY42 314 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 RNF169Q8NCN4 708 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 MAFAQ8NHW3 353 aaPredicted RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 NEK9Q8TD19 979 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 PIGOQ8TEQ8 1089 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 PRPF31Q8WWY3 499 aaKnown RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 TOP1MTQ969P6 601 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 NLRP4Q96MN2 994 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 GUCD1Q96NT3 240 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 MTMR9Q96QG7 549 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 NACC1Q96RE7 527 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 TGS1Q96RS0 853 aaKnown RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 ADAM2Q99965 735 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 INO80BQ9C086 356 aaPredicted RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM60Q9H2L4 133 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 BMP2KQ9NSY1 1161 aaPredicted RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 LRWD1Q9UFC0 647 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 NOC2LQ9Y3T9 749 aaKnown RBP7.32□□□□□ -1.24
TRAF4-213ENST00000578917 PCDHB7Q9Y5E2 793 aa7.32□□□□□ -1.24
TRAF4-213ENST00000578917 KDM3AQ9Y4C1 1321 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 MYH7BA7E2Y1 1941 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 A0A087WWV3 80 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 A0A087WZ62 844 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 POTEMA6NI47 508 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 RBAK-RBAKDNI3L0D1 243 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 WNT7AO00755 349 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 ZBTB39O15060 712 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 GPR32O75388 356 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 CSDE1O75534 798 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 CCT6AP40227 531 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 TFDP1Q14186 410 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 BTG3Q14201 252 aaPredicted RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 PDIA5Q14554 519 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 NBR1Q14596 966 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 SKIV2LQ15477 1246 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 TARBP2Q15633 366 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 SPOUT1Q5T280 376 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 FAM43BQ6ZT52 329 aaPredicted RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 SLC24A5Q71RS6 500 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 CATSPER4Q7RTX7 472 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 HSCBQ8IWL3 235 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 FIBCD1Q8N539 461 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 ZNF579Q8NAF0 562 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 TCP11Q8WWU5 503 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 PSPC1Q8WXF1 523 aaKnown RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 TMEM143Q96AN5 459 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 HSD17B14Q9BPX1 270 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 FDXACB1Q9BRP7 624 aaPredicted RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 TSPYL2Q9H2G4 693 aaPredicted RBP7.31□□□□□ -1.24
TRAF4-213ENST00000578917 ADAMTS10Q9H324 1103 aa7.31□□□□□ -1.24
TRAF4-213ENST00000578917 ATP6V0A4Q9HBG4 840 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms