RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 MTMR10Q9NXD2 777 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 SZT2Q5T011 3432 aa16.19■□□□□ 0.18
MKS1-207ENST00000578789 LAMA2P24043 3122 aaKnown RBP16.19■□□□□ 0.18
MKS1-207ENST00000578789 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.18■□□□□ 0.18
MKS1-207ENST00000578789 LAD1O00515 517 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 MAFO75444 373 aaPredicted RBP16.18■□□□□ 0.18
MKS1-207ENST00000578789 AMHP03971 560 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 VTNP04004 478 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 CD52P31358 61 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 YWHABP31946 246 aaKnown RBP16.18■□□□□ 0.18
MKS1-207ENST00000578789 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
MKS1-207ENST00000578789 CRYBB1P53674 252 aaPredicted RBP16.18■□□□□ 0.18
MKS1-207ENST00000578789 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
MKS1-207ENST00000578789 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
MKS1-207ENST00000578789 SH2D3AQ9BRG2 576 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 NKX2-4Q9H2Z4 354 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
MKS1-207ENST00000578789 GJB5O95377 273 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 RFC5P40937 340 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 PRPHP41219 470 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 TECP42680 631 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 GPC3P51654 580 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 NPEPPSP55786 919 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 PAK2Q13177 524 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 PTGDRQ13258 359 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 DRP2Q13474 957 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 KIZQ2M2Z5 673 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 OTUD6AQ7L8S5 288 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 TPH2Q8IWU9 490 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 EXOC8Q8IYI6 725 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 LINC01599Q8WXQ3 324 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 CEP170P1Q96L14 293 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 GUCD1Q96NT3 240 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 OSMRQ99650 979 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 POLR3CQ9BUI4 534 aaPredicted RBP16.17■□□□□ 0.18
MKS1-207ENST00000578789 ADAMTS10Q9H324 1103 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 ZNF576Q9H609 170 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 DHX33Q9H6R0 707 aaKnown RBP16.17■□□□□ 0.18
MKS1-207ENST00000578789 SUGCTQ9HAC7 445 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 CDHR5Q9HBB8 845 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 ERVK-5Q9HDB9 667 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 TUFT1Q9NNX1 390 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 AKT3Q9Y243 479 aa16.17■□□□□ 0.18
MKS1-207ENST00000578789 SPATA31C1P0DKV0 1188 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 MYOGP15173 224 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
MKS1-207ENST00000578789 ODR4Q5SWX8 454 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 TMCO2Q7Z6W1 182 aaPredicted RBP16.16■□□□□ 0.18
MKS1-207ENST00000578789 MYOCDQ8IZQ8 938 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
MKS1-207ENST00000578789 ERMNQ8TAM6 284 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 SLC7A3Q8WY07 619 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 PPP1R16BQ96T49 567 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 FTHL17Q9BXU8 183 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 PADI3Q9ULW8 664 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 GINS2Q9Y248 185 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 NOC2LQ9Y3T9 749 aaKnown RBP16.16■□□□□ 0.18
MKS1-207ENST00000578789 TTC3P53804 2025 aa16.16■□□□□ 0.18
MKS1-207ENST00000578789 VPS37CA5D8V6 355 aaPredicted RBP16.15■□□□□ 0.18
MKS1-207ENST00000578789 TLL1O43897 1013 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 GAS2O43903 313 aaKnown RBP16.15■□□□□ 0.18
MKS1-207ENST00000578789 MED24O75448 989 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 RPS6KA5O75582 802 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 CA3P07451 260 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 XRCC6P12956 609 aaKnown RBP eCLIP16.15■□□□□ 0.18
MKS1-207ENST00000578789 SYT1P21579 422 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 MUTP22033 750 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 RPA1P27694 616 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 DNM2P50570 870 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 NLRP11P59045 1033 aaKnown RBP16.15■□□□□ 0.18
MKS1-207ENST00000578789 PDIA5Q14554 519 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 HAUS3Q68CZ6 603 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 CATSPER3Q86XQ3 398 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 IGSF22Q8N9C0 903 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 TOP1MTQ969P6 601 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 FAM161BQ96MY7 647 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 TMX1Q9H3N1 280 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 SLC28A3Q9HAS3 691 aa16.15■□□□□ 0.18
MKS1-207ENST00000578789 MYH15Q9Y2K3 1946 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 ENPP3O14638 875 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 ZBTB39O15060 712 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 GPR182O15218 404 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 RARRES1P49788 294 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 POLGP54098 1239 aaPredicted RBP16.14■□□□□ 0.17
MKS1-207ENST00000578789 HTRA4P83105 476 aaPredicted RBP16.14■□□□□ 0.17
MKS1-207ENST00000578789 CDC42EP1Q00587 391 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 EMC2Q15006 297 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 XKR9Q5GH70 373 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 PPP2R2DQ66LE6 453 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 FAM228AQ86W67 206 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 RAD9AQ99638 391 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 RAB34Q9BZG1 259 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms