RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 TRPV2Q9Y5S1 764 aa24.25■■□□□ 1.47
CDC42EP4-203ENST00000578516 SOX1O00570 391 aaPredicted RBP24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 DKC1O60832 514 aaKnown RBP eCLIP24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 CXCL10P02778 98 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 RARRES1P49788 294 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 LPIN1Q14693 890 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 ARL6IP4Q66PJ3 421 aaKnown RBP24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 USP49Q70CQ1 688 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 TMEM143Q96AN5 459 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 AGO3Q9H9G7 860 aaKnown RBP24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 XPNPEP1Q9NQW7 623 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 DDX19AQ9NUU7 478 aaKnown RBP24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 AKT3Q9Y243 479 aa24.24■■□□□ 1.47
CDC42EP4-203ENST00000578516 IGKV6-21A0A0C4DH24 114 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 MAGEB2O15479 319 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 USO1O60763 962 aaKnown RBP24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 CAND2O75155 1236 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 MAFO75444 373 aaPredicted RBP24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 RFC2P35250 354 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 POLGP54098 1239 aaPredicted RBP24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 DNM1Q05193 864 aaKnown RBP24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 GRB10Q13322 594 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 PDIA5Q14554 519 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 EMC2Q15006 297 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 FBXO47Q5MNV8 452 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 HAUS3Q68CZ6 603 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 PSRC1Q6PGN9 363 aaPredicted RBP24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 RSPH3Q86UC2 560 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 KSR1Q8IVT5 923 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 DBF4BQ8NFT6 615 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 OSMRQ99650 979 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 CSRNP2Q9H175 543 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 KIAA1024Q9UPX6 916 aa24.23■■□□□ 1.47
CDC42EP4-203ENST00000578516 E9PMD0 336 aa24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 FGBP02675 491 aa24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 NASPP49321 788 aaPredicted RBP24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 HABP4Q5JVS0 413 aaKnown RBP24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 TMCO2Q7Z6W1 182 aaPredicted RBP24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 CELF4Q9BZC1 486 aaKnown RBP24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 RAB34Q9BZG1 259 aa24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 DHX33Q9H6R0 707 aaKnown RBP24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 MYH11P35749 1972 aa24.22■■□□□ 1.47
CDC42EP4-203ENST00000578516 ZBBXA8MT70 800 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 GRXCR1A8MXD5 290 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 GPR32O75388 356 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 BMP15O95972 392 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 DDIT3P35638 169 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 STK38Q15208 465 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 KRT79Q5XKE5 535 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 MAEAQ7L5Y9 396 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 RPUSD2Q8IZ73 545 aaKnown RBP24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 POLD4Q9HCU8 107 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 GPRC5CQ9NQ84 441 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 ANKEF1Q9NU02 776 aa24.21■■□□□ 1.47
CDC42EP4-203ENST00000578516 CD52P31358 61 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 GPC3P51654 580 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 NLRP11P59045 1033 aaKnown RBP24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 SLC39A14Q15043 492 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 PLEKHG4Q58EX7 1191 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 RASIP1Q5U651 963 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 OTUD6AQ7L8S5 288 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 CABP7Q86V35 215 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 LINC00301Q8NCQ3 95 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 HERVK_113Q902F9 699 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 EPSTI1Q96J88 318 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 CCDC43Q96MW1 224 aaKnown RBP24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 MAP7D2Q96T17 732 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 ADAMTS10Q9H324 1103 aa24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 SUCLA2Q9P2R7 463 aaPredicted RBP24.2■■□□□ 1.46
CDC42EP4-203ENST00000578516 M0QZ92 97 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 CSDE1O75534 798 aaKnown RBP24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 FGFR4P22455 802 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 DEFB103AP81534 67 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 KARSQ15046 597 aaKnown RBP24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 IER5Q5VY09 327 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 CNKSR3Q6P9H4 555 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 LRCH3Q96II8 777 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 ZNF396Q96N95 335 aaPredicted RBP24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 NACC1Q96RE7 527 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 BHMT2Q9H2M3 363 aa24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 NOC2LQ9Y3T9 749 aaKnown RBP24.19■■□□□ 1.46
CDC42EP4-203ENST00000578516 PFKMP08237 780 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 RFC5P40937 340 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 TMEM119Q4V9L6 283 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 RHPN2Q8IUC4 686 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 ASAP3Q8TDY4 903 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 LINC01599Q8WXQ3 324 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 SLC7A3Q8WY07 619 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 NLRP4Q96MN2 994 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 MTRQ99707 1265 aa24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 IFIH1Q9BYX4 1025 aaKnown RBP24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 DBR1Q9UK59 544 aaKnown RBP24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 SRPRBQ9Y5M8 271 aaKnown RBP24.18■■□□□ 1.46
CDC42EP4-203ENST00000578516 KDM3AQ9Y4C1 1321 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 ARHGEF35A5YM69 484 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 TMOD1P28289 359 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 PADI6Q6TGC4 694 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 TSHZ1Q6ZSZ6 1077 aa24.17■■□□□ 1.46
CDC42EP4-203ENST00000578516 FAM228AQ86W67 206 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms