RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 GLT8D2Q9H1C3 349 aa23.85■■□□□ 1.41
TSEN54-205ENST00000578415 CWH43Q9H720 699 aa23.85■■□□□ 1.41
TSEN54-205ENST00000578415 RNF216Q9NWF9 866 aaPredicted RBP23.85■■□□□ 1.41
TSEN54-205ENST00000578415 TMEM161AQ9NX61 479 aa23.85■■□□□ 1.41
TSEN54-205ENST00000578415 FNDC1Q4ZHG4 1894 aaPredicted RBP23.84■■□□□ 1.41
TSEN54-205ENST00000578415 GOLGA8AA7E2F4 631 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 GOLGA8BA8MQT2 603 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 ADAMTS3O15072 1205 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 VTNP04004 478 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 CYP3A4P08684 503 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 IER5LQ5T953 404 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 DHX32Q7L7V1 743 aaKnown RBP23.84■■□□□ 1.41
TSEN54-205ENST00000578415 PBXIP1Q96AQ6 731 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 RPGRIP1Q96KN7 1286 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 ATP6V0A4Q9HBG4 840 aa23.84■■□□□ 1.41
TSEN54-205ENST00000578415 MAFBQ9Y5Q3 323 aaPredicted RBP23.84■■□□□ 1.41
TSEN54-205ENST00000578415 ATF7P17544 494 aaPredicted RBP23.83■■□□□ 1.41
TSEN54-205ENST00000578415 KCNC3Q14003 757 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 ADCK5Q3MIX3 580 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 RNF20Q5VTR2 975 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 PDE12Q6L8Q7 609 aaKnown RBP23.83■■□□□ 1.41
TSEN54-205ENST00000578415 CKAP2LQ8IYA6 745 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 RASEFQ8IZ41 740 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 BBXQ8WY36 941 aaPredicted RBP23.83■■□□□ 1.41
TSEN54-205ENST00000578415 PHOX2BQ99453 314 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 ELAC1Q9H777 363 aaKnown RBP23.83■■□□□ 1.41
TSEN54-205ENST00000578415 RNF19AQ9NV58 838 aa23.83■■□□□ 1.41
TSEN54-205ENST00000578415 KLF18A0A0U1RQI7 1052 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 LAG3P18627 525 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 APOBRQ0VD83 1088 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 ZNF746Q6NUN9 644 aaPredicted RBP23.82■■□□□ 1.4
TSEN54-205ENST00000578415 METTL13Q8N6R0 699 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 ZNF577Q9BSK1 485 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 S1PR5Q9H228 398 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 LZTS1Q9Y250 596 aa23.82■■□□□ 1.4
TSEN54-205ENST00000578415 FSD2A1L4K1 749 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 PLCB3Q01970 1234 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 PFKFB3Q16875 520 aaPredicted RBP23.81■■□□□ 1.4
TSEN54-205ENST00000578415 PLPP4Q5VZY2 271 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 TMEM184AQ6ZMB5 413 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 LRRC55Q6ZSA7 311 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 TRMT1LQ7Z2T5 733 aaKnown RBP23.81■■□□□ 1.4
TSEN54-205ENST00000578415 MRPS27Q92552 414 aaKnown RBP23.81■■□□□ 1.4
TSEN54-205ENST00000578415 TMEM117Q9H0C3 514 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 TBC1D22BQ9NU19 505 aa23.81■■□□□ 1.4
TSEN54-205ENST00000578415 ESYT2A0FGR8 921 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 ADD1P35611 737 aaKnown RBP23.8■■□□□ 1.4
TSEN54-205ENST00000578415 CLCN3P51790 818 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 RCAN1P53805 252 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 TSGA10IPQ3SY00 556 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 LINC01465Q8N7H1 131 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 RASGRP4Q8TDF6 673 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 CASD1Q96PB1 797 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 TCF25Q9BQ70 676 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 ZMYND12Q9H0C1 365 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 ZDBF2Q9HCK1 2354 aa23.8■■□□□ 1.4
TSEN54-205ENST00000578415 SETQ01105 290 aaPredicted RBP23.79■■□□□ 1.4
TSEN54-205ENST00000578415 SIGLEC14Q08ET2 396 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 PKN1Q16512 942 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 ANKRD54Q6NXT1 300 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 SYCE2Q6PIF2 218 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 SUGP1Q8IWZ8 645 aaKnown RBP23.79■■□□□ 1.4
TSEN54-205ENST00000578415 SMAP1Q8IYB5 467 aaPredicted RBP23.79■■□□□ 1.4
TSEN54-205ENST00000578415 FBXL6Q8N531 539 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 ASIC4Q96FT7 647 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 ADAMTS10Q9H324 1103 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 GABBR1Q9UBS5 961 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 PCDHA10Q9Y5I2 948 aa23.79■■□□□ 1.4
TSEN54-205ENST00000578415 HIDE1A8MVS5 230 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 PSAPP07602 524 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 PBX3P40426 434 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 TECP42680 631 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 PTPN5P54829 565 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 NLRP11P59045 1033 aaKnown RBP23.78■■□□□ 1.4
TSEN54-205ENST00000578415 TCF15Q12870 199 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 KCNT2Q6UVM3 1135 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 ENTPD7Q9NQZ7 604 aa23.78■■□□□ 1.4
TSEN54-205ENST00000578415 EVPLQ92817 2033 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 MAGEB2O15479 319 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 PRR16Q569H4 304 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 BMP2KLQ5H9B9 411 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 LLGL2Q6P1M3 1020 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 REXO1Q8N1G1 1221 aaKnown RBP23.77■■□□□ 1.4
TSEN54-205ENST00000578415 LRRC43Q8N309 656 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 LENG9Q96B70 501 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 NGRNQ9NPE2 291 aaKnown RBP23.77■■□□□ 1.4
TSEN54-205ENST00000578415 PUF60Q9UHX1 559 aaKnown RBP23.77■■□□□ 1.4
TSEN54-205ENST00000578415 CEP131Q9UPN4 1083 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 AKT3Q9Y243 479 aa23.77■■□□□ 1.4
TSEN54-205ENST00000578415 HOXA2O43364 376 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 ZNF862O60290 1169 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 SRGAP2BP0DMP2 458 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 CIITAP33076 1130 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 PTPN21Q16825 1174 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 EFCAB12Q6NXP0 572 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 SKAP1Q86WV1 359 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 ECHDC2Q86YB7 292 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 LRRC71Q8N4P6 559 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 ZNF558Q96NG5 402 aa23.76■■□□□ 1.39
TSEN54-205ENST00000578415 MAP7D2Q96T17 732 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms