RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 HOXD8P13378 290 aaPredicted RBP14.52□□□□□ -0.08
CTC1-203ENST00000578240 GAP43P17677 238 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 NMT1P30419 496 aaKnown RBP14.52□□□□□ -0.08
CTC1-203ENST00000578240 SOX10P56693 466 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 PLCB2Q00722 1185 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 KCNA1Q09470 495 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 IRF5Q13568 498 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 BMT2Q1RMZ1 405 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 XKR3Q5GH77 459 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 ANKRD40Q6AI12 368 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 TRIB2Q92519 343 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 STRA6Q9BX79 667 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 GTPBP4Q9BZE4 634 aaKnown RBP14.52□□□□□ -0.08
CTC1-203ENST00000578240 KCTD10Q9H3F6 313 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 ZHX3Q9H4I2 956 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 PARVGQ9HBI0 331 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 SLC5A4Q9NY91 659 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 GNEQ9Y223 722 aaKnown RBP14.52□□□□□ -0.08
CTC1-203ENST00000578240 COL4A3BPQ9Y5P4 624 aa14.52□□□□□ -0.08
CTC1-203ENST00000578240 CCDC85CA6NKD9 419 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 FKTNO75072 461 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 FAM13AO94988 1023 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 STAT5BP51692 787 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 FCGRTP55899 365 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 PRKCZQ05513 592 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 STIM1Q13586 685 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 MTERF2Q49AM1 385 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 LRRC55Q6ZSA7 311 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 MYOCDQ8IZQ8 938 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 TRPV1Q8NER1 839 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 PPTC7Q8NI37 304 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 BSNDQ8WZ55 320 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 CEP170P1Q96L14 293 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 NIFKQ9BYG3 293 aaKnown RBP14.52□□□□□ -0.09
CTC1-203ENST00000578240 IKZF4Q9H2S9 585 aa14.52□□□□□ -0.09
CTC1-203ENST00000578240 NOP56O00567 594 aaKnown RBP14.51□□□□□ -0.09
CTC1-203ENST00000578240 DKC1O60832 514 aaKnown RBP eCLIP14.51□□□□□ -0.09
CTC1-203ENST00000578240 LGALS2P05162 132 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 PPP1R2P41236 205 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 FANCCQ00597 558 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 FAM160B1Q5W0V3 765 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 MAEAQ7L5Y9 396 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 AFG1LQ8WV93 481 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 TRIM5Q9C035 493 aa14.51□□□□□ -0.09
CTC1-203ENST00000578240 XPO4Q9C0E2 1151 aaKnown RBP14.51□□□□□ -0.09
CTC1-203ENST00000578240 DHX33Q9H6R0 707 aaKnown RBP14.51□□□□□ -0.09
CTC1-203ENST00000578240 ADGRA3Q8IWK6 1321 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
CTC1-203ENST00000578240 XRCC5P13010 732 aaKnown RBP14.5□□□□□ -0.09
CTC1-203ENST00000578240 MARK3P27448 753 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 FLT3LGP49771 235 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 IRX5P78411 483 aaPredicted RBP14.5□□□□□ -0.09
CTC1-203ENST00000578240 LAMC2Q13753 1193 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 EMC2Q15006 297 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 PLCB4Q15147 1175 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 ZC2HC1CQ53FD0 456 aaPredicted RBP14.5□□□□□ -0.09
CTC1-203ENST00000578240 FOXR2Q6PJQ5 311 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 PLPPR4Q7Z2D5 763 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 KSR1Q8IVT5 923 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 NELFCDQ8IXH7 590 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 MYCT1Q8N699 235 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 EEF2KMTQ96G04 330 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 MRFAP1L1Q96HT8 127 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 MRPL44Q9H9J2 332 aaKnown RBP14.5□□□□□ -0.09
CTC1-203ENST00000578240 IFNKQ9P0W0 207 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 SEL1LQ9UBV2 794 aa14.5□□□□□ -0.09
CTC1-203ENST00000578240 DGAT1O75907 488 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 MMP3P08254 477 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 ZNF286BP0CG31 522 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 CYBAP13498 195 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 SP3Q02447 781 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 ODR4Q5SWX8 454 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 IQSEC1Q6DN90 963 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 OTUD6AQ7L8S5 288 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 ZNF720Q7Z2F6 126 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 ZC3H3Q8IXZ2 948 aaKnown RBP14.49□□□□□ -0.09
CTC1-203ENST00000578240 ZNF507Q8TCN5 953 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 CCDC43Q96MW1 224 aaKnown RBP14.49□□□□□ -0.09
CTC1-203ENST00000578240 NAP1L5Q96NT1 182 aaPredicted RBP14.49□□□□□ -0.09
CTC1-203ENST00000578240 C16orf70Q9BSU1 422 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 TIPINQ9BVW5 301 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 BICDL2A1A5D9 508 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 EIF3DO15371 548 aaKnown RBP eCLIP14.49□□□□□ -0.09
CTC1-203ENST00000578240 GCNT3O95395 438 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 PLS3P13797 630 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 CDC25BP30305 580 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 NCKAP1LP55160 1127 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 LRRC63Q05C16 580 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 TRIM32Q13049 653 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 PKN2Q16513 984 aaKnown RBP14.49□□□□□ -0.09
CTC1-203ENST00000578240 FAM178BQ8IXR5 827 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 ATP8B4Q8TF62 1192 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 DRC1Q96MC2 740 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 THAP9Q9H5L6 903 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 ATP6V0A4Q9HBG4 840 aa14.49□□□□□ -0.09
CTC1-203ENST00000578240 UBE4BO95155 1302 aa14.48□□□□□ -0.09
CTC1-203ENST00000578240 A0A1B0GTH6 734 aa14.48□□□□□ -0.09
CTC1-203ENST00000578240 TGFB1I1O43294 461 aa14.48□□□□□ -0.09
CTC1-203ENST00000578240 TPM4P67936 248 aa14.48□□□□□ -0.09
CTC1-203ENST00000578240 TNFAIP2Q03169 654 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms