RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PPP2R5CQ13362 524 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 ORC2Q13416 577 aaPredicted RBP14.37□□□□□ -0.11
CCDC57-211ENST00000578187 GPM6BQ13491 265 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 MARCH8Q5T0T0 291 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 SWSAP1Q6NVH7 229 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 PDXDC2PQ6P474 469 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 FAM43BQ6ZT52 329 aaPredicted RBP14.37□□□□□ -0.11
CCDC57-211ENST00000578187 NME8Q8N427 588 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 ATP8B4Q8TF62 1192 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 C11orf84Q9BUA3 381 aaPredicted RBP14.37□□□□□ -0.11
CCDC57-211ENST00000578187 PCDHA2Q9Y5H9 948 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 TRPV2Q9Y5S1 764 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 RALGAPA2Q2PPJ7 1873 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 EVPLQ92817 2033 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 ADGRA3Q8IWK6 1321 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 MYH15Q9Y2K3 1946 aa14.37□□□□□ -0.11
CCDC57-211ENST00000578187 MUC3AQ02505 3323 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 COL1A2P08123 1366 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 HBP1O60381 514 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 NEMFO60524 1076 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 ATP4AP20648 1035 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 CTNNB1P35222 781 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 TRAPPC10P48553 1259 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 PAK2Q13177 524 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 ODR4Q5SWX8 454 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 MIER3Q7Z3K6 550 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-211ENST00000578187 CKAP2LQ8IYA6 745 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 SLFN12Q8IYM2 578 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 INTS4Q96HW7 963 aaKnown RBP14.36□□□□□ -0.11
CCDC57-211ENST00000578187 C1QTNF1Q9BXJ1 281 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 UBE2ZQ9H832 354 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-211ENST00000578187 GABBR1Q9UBS5 961 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 SAMM50Q9Y512 469 aa14.36□□□□□ -0.11
CCDC57-211ENST00000578187 NLRC5Q86WI3 1866 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 SMIM35A0A1B0GVV1 85 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 ENPP3O14638 875 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 RB1P06400 928 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 STAG3L1P0CL83 205 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 SPIRE1Q08AE8 756 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 GNL2Q13823 731 aaKnown RBP14.35□□□□□ -0.11
CCDC57-211ENST00000578187 BTG3Q14201 252 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-211ENST00000578187 UGCGQ16739 394 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 PUS10Q3MIT2 529 aaKnown RBP14.35□□□□□ -0.11
CCDC57-211ENST00000578187 MTHFD1LQ6UB35 978 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 BANK1Q8NDB2 785 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-211ENST00000578187 FAM167AQ96KS9 214 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 NECAB3Q96P71 396 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-211ENST00000578187 MTMR9Q96QG7 549 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 FAM50BQ9Y247 325 aa14.35□□□□□ -0.11
CCDC57-211ENST00000578187 PRRC2BQ5JSZ5 2229 aaKnown RBP14.34□□□□□ -0.11
CCDC57-211ENST00000578187 ZBTB42B2RXF5 422 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 H3BQV1 296 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 EML1O00423 815 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 NCK2O43639 380 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 ZNF862O60290 1169 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 BAG4O95429 457 aaKnown RBP14.34□□□□□ -0.11
CCDC57-211ENST00000578187 KCNA5P22460 613 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 CD52P31358 61 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 TMEM62Q0P6H9 643 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 CALCRLQ16602 461 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 ZNF484Q5JVG2 852 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 TTC38Q5R3I4 469 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 CELF4Q9BZC1 486 aaKnown RBP14.34□□□□□ -0.11
CCDC57-211ENST00000578187 LMAN2LQ9H0V9 348 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 TMEM60Q9H2L4 133 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 NSUN3Q9H649 340 aaKnown RBP14.34□□□□□ -0.11
CCDC57-211ENST00000578187 LRFN2Q9ULH4 789 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
CCDC57-211ENST00000578187 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
CCDC57-211ENST00000578187 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
CCDC57-211ENST00000578187 C5orf67F2Z3F1 127 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 OATP04181 439 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 ATP2B1P20020 1258 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 KLRC1P26715 233 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 MCM7P33993 719 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 BMPR1AP36894 532 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 TOB1P50616 345 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-211ENST00000578187 PRKCEQ02156 737 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 LEXMQ3ZCV2 418 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
CCDC57-211ENST00000578187 POTEHQ6S545 545 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 NPAS4Q8IUM7 802 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 TRAPPC12Q8WVT3 735 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 PPP2R3CQ969Q6 453 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 PLVAPQ9BX97 442 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 PADI3Q9ULW8 664 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 GINS2Q9Y248 185 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 KDM3AQ9Y4C1 1321 aa14.33□□□□□ -0.12
CCDC57-211ENST00000578187 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.32□□□□□ -0.12
CCDC57-211ENST00000578187 MARCH6O60337 910 aa14.32□□□□□ -0.12
CCDC57-211ENST00000578187 DGKIO75912 1065 aa14.32□□□□□ -0.12
CCDC57-211ENST00000578187 NFX1Q12986 1120 aaKnown RBP14.32□□□□□ -0.12
CCDC57-211ENST00000578187 EPHA7Q15375 998 aa14.32□□□□□ -0.12
CCDC57-211ENST00000578187 MCTP1Q6DN14 999 aa14.32□□□□□ -0.12
CCDC57-211ENST00000578187 HSCBQ8IWL3 235 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms