RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ITGB1P05556 798 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 FAM86B2P0C5J1 330 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 NDUFV1P49821 464 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 SETQ01105 290 aaPredicted RBP18.1■□□□□ 0.49
VAPA-204ENST00000577901 KRT76Q01546 638 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
VAPA-204ENST00000577901 MTHFD1LQ6UB35 978 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 KLHL23Q8NBE8 558 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 SPPL3Q8TCT6 385 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 TBC1D32Q96NH3 1257 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 LLPHQ9BRT6 129 aaKnown RBP18.1■□□□□ 0.49
VAPA-204ENST00000577901 WDFY4Q6ZS81 3184 aa18.1■□□□□ 0.49
VAPA-204ENST00000577901 KDM3AQ9Y4C1 1321 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 M0R2N6 131 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 DTNBO60941 627 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 ATG7O95352 703 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 FDPSP14324 419 aaKnown RBP18.09■□□□□ 0.49
VAPA-204ENST00000577901 CIITAP33076 1130 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 GATMP50440 423 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 SLC26A2P50443 739 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 TRIM29Q14134 588 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 TMEM266Q2M3C6 531 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 KRT25Q7Z3Z0 450 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 ADGRD2Q7Z7M1 963 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 CCDC83Q8IWF9 413 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 TBCKQ8TEA7 893 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 POF1BQ8WVV4 589 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 TMX1Q9H3N1 280 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 BRMS1Q9HCU9 246 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 LRFN2Q9ULH4 789 aa18.09■□□□□ 0.49
VAPA-204ENST00000577901 TRIOO75962 3097 aa18.08■□□□□ 0.49
VAPA-204ENST00000577901 IGLV3-22A0A075B6J6 115 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 JAK2O60674 1132 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 ABCB7O75027 752 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 IBSPP21815 317 aaPredicted RBP18.08■□□□□ 0.48
VAPA-204ENST00000577901 KLRC1P26715 233 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 NFX1Q12986 1120 aaKnown RBP18.08■□□□□ 0.48
VAPA-204ENST00000577901 NONOQ15233 471 aaKnown RBP eCLIP18.08■□□□□ 0.482e-7■■□□□ 12.8
VAPA-204ENST00000577901 PRR16Q569H4 304 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 ALYREFQ86V81 257 aaKnown RBP18.08■□□□□ 0.48
VAPA-204ENST00000577901 MSLNLQ96KJ4 702 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 ZNF577Q9BSK1 485 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 BACH2Q9BYV9 841 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 MUTYHQ9UIF7 546 aa18.08■□□□□ 0.48
VAPA-204ENST00000577901 IGKV6D-21A0A0A0MT36 114 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 CCDC194A0A1B0GVG4 234 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 DDX39AO00148 427 aaKnown RBP18.07■□□□□ 0.48
VAPA-204ENST00000577901 IPO5O00410 1097 aaKnown RBP18.07■□□□□ 0.48
VAPA-204ENST00000577901 EYA4O95677 639 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 CCNE2O96020 404 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 SARSP49591 514 aaKnown RBP18.07■□□□□ 0.48
VAPA-204ENST00000577901 NPY5RQ15761 445 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 HERC4Q5GLZ8 1057 aaPredicted RBP18.07■□□□□ 0.48
VAPA-204ENST00000577901 HFE2Q6ZVN8 426 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 RNF135Q8IUD6 432 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 EFHBQ8N7U6 833 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 GJB4Q9NTQ9 266 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 TBC1D22BQ9NU19 505 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 CLEC1BQ9P126 229 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 TCEAL9Q9UHQ7 104 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 GINS2Q9Y248 185 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 PCDHB7Q9Y5E2 793 aa18.07■□□□□ 0.48
VAPA-204ENST00000577901 MYO7AQ13402 2215 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 BACH1O14867 736 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 HBP1O60381 514 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 KRT2P35908 639 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 NRIP1P48552 1158 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 MCM2P49736 904 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
VAPA-204ENST00000577901 ST3GAL1Q11201 340 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 FAM160B1Q5W0V3 765 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 ABHD15Q6UXT9 468 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 FAM43BQ6ZT52 329 aaPredicted RBP18.06■□□□□ 0.48
VAPA-204ENST00000577901 ATP8B4Q8TF62 1192 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 KCNH6Q9H252 994 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 ERVK-5Q9HDB9 667 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 NOC2LQ9Y3T9 749 aaKnown RBP18.06■□□□□ 0.48
VAPA-204ENST00000577901 KIAA1671Q9BY89 1806 aa18.06■□□□□ 0.48
VAPA-204ENST00000577901 MGEA5O60502 916 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 RPS6KA5O75582 802 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 COASYQ13057 564 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 SPOUT1Q5T280 376 aaKnown RBP18.05■□□□□ 0.48
VAPA-204ENST00000577901 RBM23Q86U06 439 aaKnown RBP18.05■□□□□ 0.48
VAPA-204ENST00000577901 KIAA0319LQ8IZA0 1049 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 FBXL18Q96ME1 805 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 ADAM2Q99965 735 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 CDHR5Q9HBB8 845 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 RGS18Q9NS28 235 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 PCDHB12Q9Y5F1 795 aa18.05■□□□□ 0.48
VAPA-204ENST00000577901 COL1A2P08123 1366 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 MUC6Q6W4X9 2439 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 CYP3A7-CYP3A51PA0A087WV96 503 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 DENND3A2RUS2 1198 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 CYP3A7P24462 503 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 NHLH1Q02575 133 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 INF2Q27J81 1249 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 Q4G0T1 1027 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 ZNF484Q5JVG2 852 aa18.04■□□□□ 0.48
VAPA-204ENST00000577901 ODR4Q5SWX8 454 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms