RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 FAM228AQ86W67 206 aa13.4□□□□□ -0.26
CDH8-202ENST00000577228 METTL13Q8N6R0 699 aa13.4□□□□□ -0.26
CDH8-202ENST00000577228 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
CDH8-202ENST00000577228 CDCA3Q99618 268 aaPredicted RBP13.4□□□□□ -0.26
CDH8-202ENST00000577228 PHF7Q9BWX1 381 aaPredicted RBP13.4□□□□□ -0.26
CDH8-202ENST00000577228 FAM217BQ9NTX9 383 aaPredicted RBP13.4□□□□□ -0.26
CDH8-202ENST00000577228 TBC1D22BQ9NU19 505 aa13.4□□□□□ -0.26
CDH8-202ENST00000577228 TMEM161AQ9NX61 479 aa13.4□□□□□ -0.26
CDH8-202ENST00000577228 ESYT2A0FGR8 921 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 FSCN2O14926 492 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 GPR32O75388 356 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 PSAPP07602 524 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 SRGAP2BP0DMP2 458 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 ERVFC1P60507 584 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 ZXDAP98168 799 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 KRT32Q14532 448 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 DSC3Q14574 896 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 BMP2KLQ5H9B9 411 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 TRMT1LQ7Z2T5 733 aaKnown RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 BMP8AQ7Z5Y6 402 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 SMAP1Q8IYB5 467 aaPredicted RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 VN1R2Q8NFZ6 395 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 CRYGNQ8WXF5 182 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 PBXIP1Q96AQ6 731 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 RPGRIP1Q96KN7 1286 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 CWH43Q9H720 699 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 ELAC1Q9H777 363 aaKnown RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
CDH8-202ENST00000577228 MAFBQ9Y5Q3 323 aaPredicted RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
CDH8-202ENST00000577228 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 MAGEB2O15479 319 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 HOXA2O43364 376 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
CDH8-202ENST00000577228 METAP2P50579 478 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH8-202ENST00000577228 CLCN3P51790 818 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 FAM189BP81408 668 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 FGD1P98174 961 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 TSGA10IPQ3SY00 556 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 PLPP4Q5VZY2 271 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 SUGP1Q8IWZ8 645 aaKnown RBP13.38□□□□□ -0.27
CDH8-202ENST00000577228 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
CDH8-202ENST00000577228 CCDC12Q8WUD4 166 aaPredicted RBP13.38□□□□□ -0.27
CDH8-202ENST00000577228 SUSD6Q92537 303 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 MRPS27Q92552 414 aaKnown RBP13.38□□□□□ -0.27
CDH8-202ENST00000577228 FAM167AQ96KS9 214 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 C6orf50Q9HD87 102 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 PUF60Q9UHX1 559 aaKnown RBP13.38□□□□□ -0.27
CDH8-202ENST00000577228 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
CDH8-202ENST00000577228 EVPLQ92817 2033 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 ADAMTS3O15072 1205 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
CDH8-202ENST00000577228 ADD1P35611 737 aaKnown RBP13.37□□□□□ -0.27
CDH8-202ENST00000577228 APOBRQ0VD83 1088 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 PKN1Q16512 942 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 PRR16Q569H4 304 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 ABI1Q8IZP0 508 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 LRRC43Q8N309 656 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 TCF25Q9BQ70 676 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 ZMYND12Q9H0C1 365 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
CDH8-202ENST00000577228 WDR64B1ANS9 1081 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 ZSCAN20P17040 1043 aaPredicted RBP13.36□□□□□ -0.27
CDH8-202ENST00000577228 TMOD1P28289 359 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 GNA11P29992 359 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 PPM1AP35813 382 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 TECP42680 631 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
CDH8-202ENST00000577228 PLCB3Q01970 1234 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 EFCAB12Q6NXP0 572 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 ANKRD54Q6NXT1 300 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 LLGL2Q6P1M3 1020 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 KCNT2Q6UVM3 1135 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 LINC01465Q8N7H1 131 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 PRSS33Q8NF86 280 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 SCLT1Q96NL6 688 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 CASD1Q96PB1 797 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 ADAMTS10Q9H324 1103 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 RNF19AQ9NV58 838 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
CDH8-202ENST00000577228 MYH9P35579 1960 aaKnown RBP13.35□□□□□ -0.27
CDH8-202ENST00000577228 OATP04181 439 aa13.35□□□□□ -0.27
CDH8-202ENST00000577228 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
CDH8-202ENST00000577228 CIITAP33076 1130 aa13.35□□□□□ -0.27
CDH8-202ENST00000577228 PBX3P40426 434 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms