RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PLCB3Q01970 1234 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 KRT17Q04695 432 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 KCNC3Q14003 757 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 KIZQ2M2Z5 673 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 ABHD15Q6UXT9 468 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 SGMS1Q86VZ5 419 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 CCDC60Q8IWA6 550 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 CKAP2LQ8IYA6 745 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 ABI1Q8IZP0 508 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 LRRC43Q8N309 656 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 PGBD1Q96JS3 809 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 OSMRQ99650 979 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 TMEM117Q9H0C3 514 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 S1PR5Q9H228 398 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 CWH43Q9H720 699 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 CDHR5Q9HBB8 845 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 HCSTQ9UBK5 93 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 TCEAL9Q9UHQ7 104 aa13.24□□□□□ -0.29
CTDNEP1-212ENST00000576613 CNTNAP5Q8WYK1 1306 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 SLC27A2O14975 620 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 FAM189BP81408 668 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 APOBRQ0VD83 1088 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 TPRNQ4KMQ1 711 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 CES5AQ6NT32 575 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 LLGL2Q6P1M3 1020 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 FAM228AQ86W67 206 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 METTL13Q8N6R0 699 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 CASP10Q92851 521 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 ATOH1Q92858 354 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 PPP1R16BQ96T49 567 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 LRRC2Q9BYS8 371 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 FAM86C1Q9NVL1 165 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 CEP131Q9UPN4 1083 aa13.23□□□□□ -0.29
CTDNEP1-212ENST00000576613 MYH9P35579 1960 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZFHX2Q9C0A1 2572 aaPredicted RBP13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZBTB42B2RXF5 422 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 IPO5O00410 1097 aaKnown RBP13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 C22orf31O95567 290 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 VTNP04004 478 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZSCAN20P17040 1043 aaPredicted RBP13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 MTMR3Q13615 1198 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 SYCE2Q6PIF2 218 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 APOA5Q6Q788 366 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 KCNT2Q6UVM3 1135 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 TMC7Q7Z402 723 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 PLA2G4DQ86XP0 818 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 UBALD2Q8IYN6 164 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 RIPOR3Q96MK2 946 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 NECTIN4Q96NY8 510 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 BARHL2Q9NY43 387 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 SORCS3Q9UPU3 1222 aa13.22□□□□□ -0.29
CTDNEP1-212ENST00000576613 HIDE1A8MVS5 230 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 MAGEB2O15479 319 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 GPR32O75388 356 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 TMOD1P28289 359 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 SETQ01105 290 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 ITIH3Q06033 890 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 DSC3Q14574 896 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 SMC1AQ14683 1233 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 RTN1Q16799 776 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF746Q6NUN9 644 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 SMAP1Q8IYB5 467 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 KREMEN2Q8NCW0 462 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 ZNF577Q9BSK1 485 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 LSG1Q9H089 658 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 TBC1D22BQ9NU19 505 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 SPG21Q9NZD8 308 aa13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.29
CTDNEP1-212ENST00000576613 CACNA1HO95180 2353 aa13.21□□□□□ -0.3
CTDNEP1-212ENST00000576613 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 DHX15O43143 795 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 ZBTB43O43298 467 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 PSAPP07602 524 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 ATP4AP20648 1035 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 RNF20Q5VTR2 975 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 MCTP2Q6DN12 878 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 LRRC55Q6ZSA7 311 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 FAM167AQ96KS9 214 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 ADAM7Q9H2U9 754 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
CTDNEP1-212ENST00000576613 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms