RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	28.33	■■■□□ 2.13	3e-9	■□□□□ 9.7
SRRM2-223	ENST00000575701	LRRC71	Q8N4P6	559 aa		28.33	■■■□□ 2.13
SRRM2-223	ENST00000575701	SNX21	Q969T3	373 aa		28.33	■■■□□ 2.13
SRRM2-223	ENST00000575701	AGO3	Q9H9G7	860 aa	Known RBP	28.33	■■■□□ 2.13
SRRM2-223	ENST00000575701	SUGCT	Q9HAC7	445 aa		28.33	■■■□□ 2.13
SRRM2-223	ENST00000575701	WRAP73	Q9P2S5	460 aa	Predicted RBP	28.33	■■■□□ 2.13
SRRM2-223	ENST00000575701	GINS2	Q9Y248	185 aa		28.33	■■■□□ 2.13
SRRM2-223	ENST00000575701	TMEM150B	A6NC51	233 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	MAF	O75444	373 aa	Predicted RBP	28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	VTN	P04004	478 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	CD52	P31358	61 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	TOB1	P50616	345 aa	Predicted RBP	28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	CTTN	Q14247	550 aa	Known RBP	28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	PPP2R2D	Q66LE6	453 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	TPH2	Q8IWU9	490 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	MYOCD	Q8IZQ8	938 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	GUCD1	Q96NT3	240 aa		28.32	■■■□□ 2.12
SRRM2-223	ENST00000575701	LOXHD1	Q8IVV2	1947 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	POTEM	A6NI47	508 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	GPR32	O75388	356 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	RFC5	P40937	340 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	KIZ	Q2M2Z5	673 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	PLA2G4F	Q68DD2	849 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	ERMN	Q8TAM6	284 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	SLC7A3	Q8WY07	619 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	CEP170P1	Q96L14	293 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	RAD9A	Q99638	391 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	PADI3	Q9ULW8	664 aa		28.31	■■■□□ 2.12
SRRM2-223	ENST00000575701	GAS2	O43903	313 aa	Known RBP	28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	RPS6KA5	O75582	802 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	CA3	P07451	260 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	MYOG	P15173	224 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	TEC	P42680	631 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	C4orf32	Q8N8J7	132 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	TOP1MT	Q969P6	601 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	OSMR	Q99650	979 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	TUFT1	Q9NNX1	390 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	STXBP5L	Q9Y2K9	1186 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	PCDHB6	Q9Y5E3	794 aa		28.3	■■■□□ 2.12
SRRM2-223	ENST00000575701	ARID2	Q68CP9	1835 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	GPR182	O15218	404 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	FXR2	P51116	673 aa	Known RBP eCLIP	28.29	■■■□□ 2.12	2e-12	■■□□□ 14.2
SRRM2-223	ENST00000575701	NLRP11	P59045	1033 aa	Known RBP	28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	PTGDR	Q13258	359 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	NBR1	Q14596	966 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	SH2D3A	Q9BRG2	576 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	RAB34	Q9BZG1	259 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	DHX33	Q9H6R0	707 aa	Known RBP	28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	ANKEF1	Q9NU02	776 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	INSL6	Q9Y581	213 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	STK24	Q9Y6E0	443 aa		28.29	■■■□□ 2.12
SRRM2-223	ENST00000575701	PRPH	P41219	470 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	GPC3	P51654	580 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	POLG	P54098	1239 aa	Predicted RBP	28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	NPEPPS	P55786	919 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	XKR9	Q5GH70	373 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	HAUS3	Q68CZ6	603 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	BRAP	Q7Z569	592 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	TMEM40	Q8WWA1	233 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	PPP1R16B	Q96T49	567 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	CDX2	Q99626	313 aa	Predicted RBP	28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	POLR3C	Q9BUI4	534 aa	Predicted RBP	28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	ADAMTS10	Q9H324	1103 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	CDHR5	Q9HBB8	845 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	ERVK-5	Q9HDB9	667 aa		28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	NOC2L	Q9Y3T9	749 aa	Known RBP	28.28	■■■□□ 2.12
SRRM2-223	ENST00000575701	COL4A6	Q14031	1691 aa		28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	XRCC6	P12956	609 aa	Known RBP eCLIP	28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	NFX1	Q12986	1120 aa	Known RBP	28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	GRIN2C	Q14957	1233 aa		28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	TMCO2	Q7Z6W1	182 aa	Predicted RBP	28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	CCDC43	Q96MW1	224 aa	Known RBP	28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	SCLT1	Q96NL6	688 aa		28.27	■■■□□ 2.12
SRRM2-223	ENST00000575701	ENPP3	O14638	875 aa		28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	MUT	P22033	750 aa		28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	EIF4B	P23588	611 aa	Known RBP	28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	HTRA4	P83105	476 aa	Predicted RBP	28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	PDIA5	Q14554	519 aa		28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	ZNF410	Q86VK4	478 aa		28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	HSCB	Q8IWL3	235 aa		28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	TSPYL2	Q9H2G4	693 aa	Predicted RBP	28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	SUCLA2	Q9P2R7	463 aa	Predicted RBP	28.26	■■■□□ 2.11
SRRM2-223	ENST00000575701	RPA1	P27694	616 aa		28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	DRP2	Q13474	957 aa		28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	FAM117B	Q6P1L5	589 aa		28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	TCP11	Q8WWU5	503 aa		28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	NLRP7	Q8WX94	980 aa		28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	RNF216	Q9NWF9	866 aa	Predicted RBP	28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	ST3GAL5	Q9UNP4	418 aa		28.25	■■■□□ 2.11
SRRM2-223	ENST00000575701	VPS37C	A5D8V6	355 aa	Predicted RBP	28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	SPATA31C1	P0DKV0	1188 aa		28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	TAP1	Q03518	808 aa		28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	EMC2	Q15006	297 aa		28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	FAM228A	Q86W67	206 aa		28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	CATSPER3	Q86XQ3	398 aa		28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	ZNF579	Q8NAF0	562 aa	Known RBP	28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	LRWD1	Q9UFC0	647 aa		28.24	■■■□□ 2.11
SRRM2-223	ENST00000575701	DGAT1	O75907	488 aa		28.23	■■■□□ 2.11

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms