RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
SMG6-218ENST00000575454 IGKV6D-21A0A0A0MT36 114 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 HIDE1A8MVS5 230 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 BRD1O95696 1058 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 PDGFBP01127 241 aaPredicted RBP10.25□□□□□ -0.77
SMG6-218ENST00000575454 FGFR1P11362 822 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 ZSCAN20P17040 1043 aaPredicted RBP10.25□□□□□ -0.77
SMG6-218ENST00000575454 APOBRQ0VD83 1088 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 UBE2SQ16763 222 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 MIS18BP1Q6P0N0 1132 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 MB21D2Q8IYB1 491 aaPredicted RBP10.25□□□□□ -0.77
SMG6-218ENST00000575454 TMEM105Q8N8V8 129 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 TDRD5Q8NAT2 981 aaKnown RBP10.25□□□□□ -0.77
SMG6-218ENST00000575454 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 APOL5Q9BWW9 433 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 GLT8D2Q9H1C3 349 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 LY9Q9HBG7 655 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 AGO4Q9HCK5 861 aaKnown RBP10.25□□□□□ -0.77
SMG6-218ENST00000575454 HCFC2Q9Y5Z7 792 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 FAM186AA6NE01 2351 aa10.25□□□□□ -0.77
SMG6-218ENST00000575454 C2CD4DB7Z1M9 353 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 MEIS1O00470 390 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 MAGEB2O15479 319 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 SP100P23497 879 aaPredicted RBP10.24□□□□□ -0.77
SMG6-218ENST00000575454 TMOD1P28289 359 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 MCM5P33992 734 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 ZNF76P36508 570 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 LIFRP42702 1097 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 ID4P47928 161 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 ALDH7A1P49419 539 aaKnown RBP10.24□□□□□ -0.77
SMG6-218ENST00000575454 ANTXR2P58335 489 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 GIT2Q14161 759 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 KIZQ2M2Z5 673 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 PDXDC2PQ6P474 469 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 ABHD15Q6UXT9 468 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 NIPA1Q7RTP0 329 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 HEATR3Q7Z4Q2 680 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 CKAP2LQ8IYA6 745 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 TMEM40Q8WWA1 233 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 ACSF2Q96CM8 615 aaPredicted RBP10.24□□□□□ -0.77
SMG6-218ENST00000575454 CASD1Q96PB1 797 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 MRPL9Q9BYD2 267 aaKnown RBP10.24□□□□□ -0.77
SMG6-218ENST00000575454 POMKQ9H5K3 350 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 CDHR5Q9HBB8 845 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 ZNF302Q9NR11 478 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 STK39Q9UEW8 545 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 DBR1Q9UK59 544 aaKnown RBP10.24□□□□□ -0.77
SMG6-218ENST00000575454 CEP131Q9UPN4 1083 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 SLC12A7Q9Y666 1083 aa10.24□□□□□ -0.77
SMG6-218ENST00000575454 TPRP12270 2363 aaKnown RBP10.23□□□□□ -0.77
SMG6-218ENST00000575454 C2orf71A6NGG8 1288 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 PRC1O43663 620 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 CLASP2O75122 1294 aaKnown RBP10.23□□□□□ -0.77
SMG6-218ENST00000575454 PLEKHA8P1O95397 391 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 EOMESO95936 686 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 ARP10275 920 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 PTH1RQ03431 593 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 ITGB3BPQ13352 177 aaPredicted RBP10.23□□□□□ -0.77
SMG6-218ENST00000575454 DSC3Q14574 896 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 PPP1R18Q6NYC8 613 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 LRRC55Q6ZSA7 311 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 FRMD5Q7Z6J6 570 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 FAM228AQ86W67 206 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 ADSSL1Q8N142 457 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 CYP2W1Q8TAV3 490 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
SMG6-218ENST00000575454 MAP7D2Q96T17 732 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 OSMRQ99650 979 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 RTP3Q9BQQ7 232 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 MYL10Q9BUA6 226 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 IL25Q9H293 177 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 SEMA4AQ9H3S1 761 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 RIC8AQ9NPQ8 531 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 TBC1D22BQ9NU19 505 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 LIMD1Q9UGP4 676 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 TCEAL9Q9UHQ7 104 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
SMG6-218ENST00000575454 ZFHX4Q86UP3 3567 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 A0A0U1RQF3 1178 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 SH2B2O14492 632 aaPredicted RBP10.22□□□□□ -0.77
SMG6-218ENST00000575454 GPR32O75388 356 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 C22orf31O95567 290 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 CXCL14O95715 111 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 IGHDP01880 384 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 EIF4BP23588 611 aaKnown RBP10.22□□□□□ -0.77
SMG6-218ENST00000575454 CHMLP26374 656 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 POLGP54098 1239 aaPredicted RBP10.22□□□□□ -0.77
SMG6-218ENST00000575454 NAPAP54920 295 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 CDC42EP1Q00587 391 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 AP3B2Q13367 1082 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 KIAA1841Q6NSI8 718 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 SWSAP1Q6NVH7 229 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 TMTC3Q6ZXV5 915 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 OTOP3Q7RTS5 596 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 PPFIBP1Q86W92 1011 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 ECHDC2Q86YB7 292 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 CMTR1Q8N1G2 835 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms