RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PPP1R16BQ96T49 567 aa11.84□□□□□ -0.51
TVP23B-208ENST00000575261 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
TVP23B-208ENST00000575261 TLR9Q9NR96 1032 aa11.84□□□□□ -0.51
TVP23B-208ENST00000575261 MUTYHQ9UIF7 546 aa11.84□□□□□ -0.51
TVP23B-208ENST00000575261 MAFBQ9Y5Q3 323 aaPredicted RBP11.84□□□□□ -0.51
TVP23B-208ENST00000575261 WDR64B1ANS9 1081 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 C9IYK1 514 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 PPFIA3O75145 1194 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 GLP2RO95838 553 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 VTNP04004 478 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 ATP4AP20648 1035 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 AKAP17AQ02040 695 aaKnown RBP11.83□□□□□ -0.52
TVP23B-208ENST00000575261 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 COASYQ13057 564 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 PRR16Q569H4 304 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 Q6ZUG5 572 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 RBM23Q86U06 439 aaKnown RBP11.83□□□□□ -0.52
TVP23B-208ENST00000575261 SKAP1Q86WV1 359 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 RNF135Q8IUD6 432 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 CCDC148Q8NFR7 591 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 BICD2Q8TD16 824 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 BRF1Q92994 677 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 JAKMIP1Q96N16 626 aaKnown RBP11.83□□□□□ -0.52
TVP23B-208ENST00000575261 MAP7D2Q96T17 732 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 CDCA3Q99618 268 aaPredicted RBP11.83□□□□□ -0.52
TVP23B-208ENST00000575261 KCNH6Q9H252 994 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 ELAC1Q9H777 363 aaKnown RBP11.83□□□□□ -0.52
TVP23B-208ENST00000575261 TLE6Q9H808 572 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 TMEM161AQ9NX61 479 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 CLEC1BQ9P126 229 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 GABBR1Q9UBS5 961 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 BARX2Q9UMQ3 279 aaPredicted RBP11.83□□□□□ -0.52
TVP23B-208ENST00000575261 SAMM50Q9Y512 469 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 ZNF318Q5VUA4 2279 aa11.83□□□□□ -0.52
TVP23B-208ENST00000575261 WDR81Q562E7 1941 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 MAGEB2O15479 319 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 HOXA2O43364 376 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 GPR32O75388 356 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 FGF18O76093 207 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 CPA1P15085 419 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 LAG3P18627 525 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 TMOD1P28289 359 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 CIITAP33076 1130 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 CLCN3P51790 818 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 PKN1Q16512 942 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 PDE12Q6L8Q7 609 aaKnown RBP11.82□□□□□ -0.52
TVP23B-208ENST00000575261 BLOC1S2Q6QNY1 142 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 HFE2Q6ZVN8 426 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
TVP23B-208ENST00000575261 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 COLGALT1Q8NBJ5 622 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 PHKBQ93100 1093 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 AKT3Q9Y243 479 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 PCDHGC5Q9Y5F6 944 aa11.82□□□□□ -0.52
TVP23B-208ENST00000575261 ADAMTS3O15072 1205 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
TVP23B-208ENST00000575261 OATP04181 439 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 SRGAP2BP0DMP2 458 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 FGFR1P11362 822 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 DSC3Q14574 896 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 DUSP6Q16828 381 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 ABI1Q8IZP0 508 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 LRRC43Q8N309 656 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 FBXL16Q8N461 479 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 RASGRP4Q8TDF6 673 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 KCNB2Q92953 911 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 LENG9Q96B70 501 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
TVP23B-208ENST00000575261 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 TYW1Q9NV66 732 aaKnown RBP11.81□□□□□ -0.52
TVP23B-208ENST00000575261 HCSTQ9UBK5 93 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 LZTS1Q9Y250 596 aa11.81□□□□□ -0.52
TVP23B-208ENST00000575261 USP15Q9Y4E8 981 aaPredicted RBP11.81□□□□□ -0.52
TVP23B-208ENST00000575261 TECTAO75443 2155 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 LOC730098B7Z3J9 87 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 PER2O15055 1255 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 GAS7O60861 476 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 ZSCAN20P17040 1043 aaPredicted RBP11.8□□□□□ -0.52
TVP23B-208ENST00000575261 RPS6KB1P23443 525 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 EIF4BP23588 611 aaKnown RBP11.8□□□□□ -0.52
TVP23B-208ENST00000575261 SFNP31947 248 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 HSPA4P34932 840 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 PPM1AP35813 382 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 NLRP11P59045 1033 aaKnown RBP11.8□□□□□ -0.52
TVP23B-208ENST00000575261 FAM189BP81408 668 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 PRKCEQ02156 737 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 EFCAB12Q6NXP0 572 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 LRRC71Q8N4P6 559 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 LINC01465Q8N7H1 131 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 EDAQ92838 391 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 SCLT1Q96NL6 688 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
TVP23B-208ENST00000575261 AGXT2Q9BYV1 514 aa11.8□□□□□ -0.52
TVP23B-208ENST00000575261 CWH43Q9H720 699 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms