RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PPP1R2	P41236	205 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	PSEN2	P49810	448 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZNF131	P52739	623 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	RTP1	P59025	263 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	BEX3	Q00994	111 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	COBLL1	Q53SF7	1204 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	MLKL	Q8NB16	471 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	ARRDC4	Q8NCT1	418 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	SH3TC2	Q8TF17	1288 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	SLC7A3	Q8WY07	619 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	KIFAP3	Q92845	792 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	DRC1	Q96MC2	740 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	MTG1	Q9BT17	334 aa	Predicted RBP	13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	1e-5	■■□□□ 12.4
PRPF8-212	ENST00000575116	C17orf75	Q9HAS0	396 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	ARID2	Q68CP9	1835 aa		13.2	□□□□□ -0.3
PRPF8-212	ENST00000575116	IGKV6-21	A0A0C4DH24	114 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZBTB42	B2RXF5	422 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	BIN1	O00499	593 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	HIP1R	O75146	1068 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	FAM13A	O94988	1023 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	MAPT	P10636	758 aa	Known RBP	13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	INSRR	P14616	1297 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	POLG	P54098	1239 aa	Predicted RBP	13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	TBC1D8B	Q0IIM8	1120 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	COASY	Q13057	564 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	MFSD10	Q14728	455 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	KCNA10	Q16322	511 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	SLC17A8	Q8NDX2	589 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	TSPY26P	Q9H489	355 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	PARVG	Q9HBI0	331 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	PAK6	Q9NQU5	681 aa	Predicted RBP	13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	OLFML3	Q9NRN5	406 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	LARS	Q9P2J5	1176 aa	Known RBP	13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	DACH1	Q9UI36	760 aa		13.19	□□□□□ -0.3
PRPF8-212	ENST00000575116	NRCAM	Q92823	1304 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	MYADML2	A6NDP7	307 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	MOXD2P	A6NHM9	499 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	ASGR1	P07306	291 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	CAPN2	P17655	700 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	IRX5	P78411	483 aa	Predicted RBP	13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	RAD51AP2	Q09MP3	1159 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	MAPK7	Q13164	816 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	EMC2	Q15006	297 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	LRRC41	Q15345	812 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	KIAA0753	Q2KHM9	967 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	IER5	Q5VY09	327 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	RETREG2	Q8NC44	543 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	TCP11	Q8WWU5	503 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	SH2D3A	Q9BRG2	576 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	NTPCR	Q9BSD7	190 aa	Known RBP	13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	NAT10	Q9H0A0	1025 aa	Known RBP	13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	UNC93B1	Q9H1C4	597 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	PRDM10	Q9NQV6	1147 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	XPNPEP1	Q9NQW7	623 aa		13.18	□□□□□ -0.3
PRPF8-212	ENST00000575116	ASAP2	O43150	1006 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	KIF20A	O95235	890 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	GNAT1	P11488	350 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	CCL5	P13501	91 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	PLS3	P13797	630 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	BMP6	P22004	513 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	SCP2	P22307	547 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	KLRC1	P26715	233 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	DNM2	P50570	870 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	CACNB1	Q02641	598 aa	Predicted RBP	13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	PPFIA1	Q13136	1202 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	GRIK4	Q16099	956 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	FAM26F	Q5R3K3	315 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	FAM102B	Q5T8I3	360 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	ISM2	Q6H9L7	571 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	DAW1	Q8N136	415 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	MYCT1	Q8N699	235 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	ARMC5	Q96C12	935 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	SEZ6L	Q9BYH1	1024 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZHX3	Q9H4I2	956 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	PCDHA2	Q9Y5H9	948 aa		13.17	□□□□□ -0.3
PRPF8-212	ENST00000575116	SFI1	A8K8P3	1242 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	RSPH10B2	B2RC85	870 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116		H0YCG3	227 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	C22orf31	O95567	290 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	RSPH10B	P0C881	870 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	SMIM10L2A	P0DMW4	78 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	SMIM10L2B	P0DMW5	78 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	TMOD1	P28289	359 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ERCC5	P28715	1186 aa	Predicted RBP	13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	HOXC8	P31273	242 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ABCD1	P33897	745 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ARL2	P36404	184 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	SMTN	P53814	917 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ADAM17	P78536	824 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	PTPN11	Q06124	597 aa	Predicted RBP	13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	STK4	Q13043	487 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	STIM1	Q13586	685 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ALCAM	Q13740	583 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	MXD4	Q14582	209 aa	Predicted RBP	13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	PPP2R5A	Q15172	486 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms