RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CYP2C9P11712 490 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 NDUFA8P51970 172 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 SLC12A3P55017 1021 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 ZNF200P98182 395 aaPredicted RBP19.01■□□□□ 0.63
NUP88-210ENST00000574867 TLE2Q04725 743 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 EMC2Q15006 297 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 PADI6Q6TGC4 694 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 MCPH1Q8NEM0 835 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 LRRC15Q8TF66 581 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 DHX58Q96C10 678 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 CTAGE1Q96RT6 745 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 TRPV6Q9H1D0 765 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 IGKV6-21A0A0C4DH24 114 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 SMIM35A0A1B0GVV1 85 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 USO1O60763 962 aaKnown RBP19.01■□□□□ 0.63
NUP88-210ENST00000574867 SSBP05455 408 aaKnown RBP eCLIP19.01■□□□□ 0.63
NUP88-210ENST00000574867 TMOD1P28289 359 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 TPRNQ4KMQ1 711 aa19.01■□□□□ 0.63
NUP88-210ENST00000574867 GADD45BO75293 160 aaPredicted RBP19■□□□□ 0.63
NUP88-210ENST00000574867 FAM160A1Q05DH4 1040 aa19■□□□□ 0.63
NUP88-210ENST00000574867 CCDC155Q8N6L0 562 aa19■□□□□ 0.63
NUP88-210ENST00000574867 MTRQ99707 1265 aa19■□□□□ 0.63
NUP88-210ENST00000574867 TIPINQ9BVW5 301 aa19■□□□□ 0.63
NUP88-210ENST00000574867 DNM2P50570 870 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 MCM6Q14566 821 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 EFCAB12Q6NXP0 572 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 SV2BQ7L1I2 683 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 CEP57L1Q8IYX8 460 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 METTL13Q8N6R0 699 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 LINC01465Q8N7H1 131 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 TCP11Q8WWU5 503 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 TNMDQ9H2S6 317 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 CAND2O75155 1236 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 CLTBP09497 229 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 CYP11B2P19099 503 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 RINT1Q6NUQ1 792 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 RUFY4Q6ZNE9 571 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 RPAINQ86UA6 219 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 RSPH3Q86UC2 560 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 CAGE1Q8TC20 777 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 MAP7D2Q96T17 732 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 LRRC27Q9C0I9 530 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 PDLIM7Q9NR12 457 aa18.99■□□□□ 0.63
NUP88-210ENST00000574867 SLFN14P0C7P3 912 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 GUCY2CP25092 1073 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 RBL2Q08999 1139 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 GPBP1Q86WP2 473 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 FMR1NBQ8N0W7 255 aaPredicted RBP18.98■□□□□ 0.63
NUP88-210ENST00000574867 LRRC71Q8N4P6 559 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 ZBTB10Q96DT7 871 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 RUSC1Q9BVN2 902 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 SUGCTQ9HAC7 445 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 XPNPEP1Q9NQW7 623 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 LMBRD1Q9NUN5 540 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 EVPLQ92817 2033 aa18.98■□□□□ 0.63
NUP88-210ENST00000574867 ACTN4O43707 911 aaKnown RBP18.97■□□□□ 0.63
NUP88-210ENST00000574867 C1orf186Q6ZWK4 172 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 ZNF710Q8N1W2 664 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 NME8Q8N427 588 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 ENGASEQ8NFI3 743 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 BMP2KQ9NSY1 1161 aaPredicted RBP18.97■□□□□ 0.63
NUP88-210ENST00000574867 KBTBD4Q9NVX7 518 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 ZNF202O95125 648 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 CLCN3P51790 818 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 AMPD3Q01432 767 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 BFSP2Q13515 415 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 DHX8Q14562 1220 aaKnown RBP18.97■□□□□ 0.63
NUP88-210ENST00000574867 IER5Q5VY09 327 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 DHX38Q92620 1227 aaKnown RBP18.97■□□□□ 0.63
NUP88-210ENST00000574867 FAM49AQ9H0Q0 323 aaPredicted RBP18.97■□□□□ 0.63
NUP88-210ENST00000574867 TBX21Q9UL17 535 aa18.97■□□□□ 0.63
NUP88-210ENST00000574867 DNAH12Q6ZR08 3092 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 PITPNM1O00562 1244 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 SNW1Q13573 536 aaKnown RBP18.96■□□□□ 0.63
NUP88-210ENST00000574867 KIAA0319LQ8IZA0 1049 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 DNAJB3Q8WWF6 145 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 PSPC1Q8WXF1 523 aaKnown RBP18.96■□□□□ 0.63
NUP88-210ENST00000574867 SERTAD1Q9UHV2 236 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 ODF2LQ9ULJ1 636 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 TANC1Q9C0D5 1861 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 CDC42EP1Q00587 391 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 TRIM71Q2Q1W2 868 aaKnown RBP18.96■□□□□ 0.63
NUP88-210ENST00000574867 LONRF3Q496Y0 759 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 KRBA2Q6ZNG9 492 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 KIFAP3Q92845 792 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 DRC1Q96MC2 740 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 TMEM39AQ9NV64 488 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 AKT3Q9Y243 479 aa18.96■□□□□ 0.63
NUP88-210ENST00000574867 KRT18P05783 430 aaKnown RBP18.95■□□□□ 0.62
NUP88-210ENST00000574867 LIG1P18858 919 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 THPOP40225 353 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 MKRN4PQ13434 485 aaPredicted RBP18.95■□□□□ 0.62
NUP88-210ENST00000574867 FAM102BQ5T8I3 360 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 CNNM3Q8NE01 707 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 WNT8BQ93098 351 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 TMEM143Q96AN5 459 aa18.95■□□□□ 0.62
NUP88-210ENST00000574867 TIGD1Q96MW7 591 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms