RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 ATL3Q6DD88 541 aa18.65■□□□□ 0.58
TMEM88-202ENST00000574668 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
TMEM88-202ENST00000574668 ATP6V0A1Q93050 837 aa18.65■□□□□ 0.58
TMEM88-202ENST00000574668 TRPC6Q9Y210 931 aa18.65■□□□□ 0.58
TMEM88-202ENST00000574668 POTEMA6NI47 508 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 P4HBP07237 508 aaKnown RBP18.64■□□□□ 0.57
TMEM88-202ENST00000574668 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
TMEM88-202ENST00000574668 DDIT3P35638 169 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 ERVK-21P61565 698 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 SPIRE1Q08AE8 756 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 BANK1Q8NDB2 785 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 TGS1Q96RS0 853 aaKnown RBP18.64■□□□□ 0.57
TMEM88-202ENST00000574668 EIF2AK1Q9BQI3 630 aaKnown RBP18.64■□□□□ 0.57
TMEM88-202ENST00000574668 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 CFAP45Q9UL16 551 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 STK24Q9Y6E0 443 aa18.64■□□□□ 0.57
TMEM88-202ENST00000574668 VWA3AA6NCI4 1184 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 MARCKSP29966 332 aaPredicted RBP18.63■□□□□ 0.57
TMEM88-202ENST00000574668 PLA2G5P39877 138 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 THPOP40225 353 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
TMEM88-202ENST00000574668 PSMC5P62195 406 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 DNM1Q05193 864 aaKnown RBP18.63■□□□□ 0.57
TMEM88-202ENST00000574668 PDIA5Q14554 519 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 PLCB4Q15147 1175 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 PTPAQ15257 358 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 TRMT1LQ7Z2T5 733 aaKnown RBP18.63■□□□□ 0.57
TMEM88-202ENST00000574668 DBF4BQ8NFT6 615 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 NEK9Q8TD19 979 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 DYDC2Q96IM9 177 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 FAM167AQ96KS9 214 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 C17orf80Q9BSJ5 609 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 OSBPL7Q9BZF2 842 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 NRBP2Q9NSY0 501 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 LMCD1Q9NZU5 365 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
TMEM88-202ENST00000574668 MAFBQ9Y5Q3 323 aaPredicted RBP18.63■□□□□ 0.57
TMEM88-202ENST00000574668 NCOR1O75376 2440 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 POTEB3A0JP26 581 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 HBP1O60381 514 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 YEATS4O95619 227 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 SMIM10L2AP0DMW4 78 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 SMIM10L2BP0DMW5 78 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 QARSP47897 775 aaKnown RBP18.62■□□□□ 0.57
TMEM88-202ENST00000574668 KRT85P78386 507 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 CYP4A11Q02928 519 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 PPFIA1Q13136 1202 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 SLC39A14Q15043 492 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 POTEBQ6S5H4 581 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 SERINC5Q86VE9 423 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 TPH2Q8IWU9 490 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 ATP8B4Q8TF62 1192 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 FAM122AQ96E09 287 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 LRFN3Q9BTN0 628 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 RNPEPQ9H4A4 650 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 CD320Q9NPF0 282 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 RGL1Q9NZL6 768 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 IGSF9BQ9UPX0 1349 aa18.62■□□□□ 0.57
TMEM88-202ENST00000574668 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 RSPH10B2B2RC85 870 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 SPTLC2O15270 562 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 EFCAB14O75071 495 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 RSPH10BP0C881 870 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 GNAT1P11488 350 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 PRKCEQ02156 737 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 MKRN4PQ13434 485 aaPredicted RBP18.61■□□□□ 0.57
TMEM88-202ENST00000574668 CTTNQ14247 550 aaKnown RBP18.61■□□□□ 0.57
TMEM88-202ENST00000574668 IL17AQ16552 155 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 UGCGQ16739 394 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 KRT79Q5XKE5 535 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 HAUS3Q68CZ6 603 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 MYOCDQ8IZQ8 938 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 IGSF22Q8N9C0 903 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 LINC00301Q8NCQ3 95 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 BBXQ8WY36 941 aaPredicted RBP18.61■□□□□ 0.57
TMEM88-202ENST00000574668 LXNQ9BS40 222 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 ZSWIM4Q9H7M6 989 aa18.61■□□□□ 0.57
TMEM88-202ENST00000574668 FAM86C2PA6NEL3 165 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 RRN3P2A6NIE6 340 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 DDX11L8A8MPP1 907 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 TREHO43280 583 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 OATP04181 439 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 CCT6AP40227 531 aaKnown RBP18.6■□□□□ 0.57
TMEM88-202ENST00000574668 IGBP1P78318 339 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 XKR3Q5GH77 459 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 SNX29Q8TEQ0 813 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 UBE2ZQ9H832 354 aaPredicted RBP18.6■□□□□ 0.57
TMEM88-202ENST00000574668 TUFT1Q9NNX1 390 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 SETD4Q9NVD3 440 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 INSL6Q9Y581 213 aa18.6■□□□□ 0.57
TMEM88-202ENST00000574668 SRPRBQ9Y5M8 271 aaKnown RBP18.6■□□□□ 0.57
TMEM88-202ENST00000574668 NRCAMQ92823 1304 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 ZNF862O60290 1169 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 SLITRK3O94933 977 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 AMHP03971 560 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 CTSHP09668 335 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 INSRRP14616 1297 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 ATP4AP20648 1035 aa18.59■□□□□ 0.57
TMEM88-202ENST00000574668 LONP1P36776 959 aaKnown RBP18.59■□□□□ 0.57
TMEM88-202ENST00000574668 GRIK4Q16099 956 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms