RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	FGFBP2	Q9BYJ0	223 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	CPVL	Q9H3G5	476 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	ADAM22	Q9P0K1	906 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	PNMA3	Q9UL41	463 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	BLOC1S6	Q9UL45	172 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	SNX24	Q9Y343	169 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	DAAM1	Q9Y4D1	1078 aa		13.78	□□□□□ -0.2
TRPV1-208	ENST00000574085	POTEM	A6NI47	508 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	ATP11A	P98196	1134 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	KLRC3	Q07444	240 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	BNIP1	Q12981	228 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	CNGA2	Q16280	664 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	CCDC38	Q502W7	563 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	COL23A1	Q86Y22	540 aa	Predicted RBP	13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	SYCE1	Q8N0S2	351 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	MGARP	Q8TDB4	240 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	DYDC1	Q8WWB3	177 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	CEP63	Q96MT8	703 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	NLRP3	Q96P20	1036 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	NUDT12	Q9BQG2	462 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	IL17RB	Q9NRM6	502 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	FGFR1OP2	Q9NVK5	253 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	ZFAT	Q9P243	1243 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	TRIM33	Q9UPN9	1127 aa		13.77	□□□□□ -0.2
TRPV1-208	ENST00000574085	SMCO2	A6NFE2	343 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085		A6NHS1	94 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	GOLGA8H	P0CJ92	632 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	PTEN	P60484	403 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	SEPT2	Q15019	361 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	SETDB1	Q15047	1291 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	LRRC14	Q15048	493 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	C6orf118	Q5T5N4	469 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	CC2D2B	Q6DHV5	1058 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	FOXR2	Q6PJQ5	311 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	MAEA	Q7L5Y9	396 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	RBM12B	Q8IXT5	1001 aa	Known RBP	13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	SNX29	Q8TEQ0	813 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	GLG1	Q92896	1179 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	HES6	Q96HZ4	224 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	IFT74	Q96LB3	600 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	ARHGEF3	Q9NR81	526 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	THRAP3	Q9Y2W1	955 aa	Known RBP	13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	AHCYL1	O43865	530 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	FLOT1	O75955	427 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	SUN1	O94901	812 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	UPP2	O95045	317 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	GNA14	O95837	355 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	FES	P07332	822 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	H2AFZ	P0C0S5	128 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	SLC9A1	P19634	815 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	KCNH2	Q12809	1159 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	CALCRL	Q16602	461 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	FAM26F	Q5R3K3	315 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	H2AFV	Q71UI9	128 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	B4GALNT2	Q8NHY0	566 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	FBXO25	Q8TCJ0	367 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	AMFR	Q9UKV5	643 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	ZBTB1	Q9Y2K1	713 aa		13.77	□□□□□ -0.21
TRPV1-208	ENST00000574085	WTIP	A6NIX2	430 aa	Predicted RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	TCP11X1	B4DZS4	312 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	MKRN4P	Q13434	485 aa	Predicted RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	TRIM68	Q6AZZ1	485 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	ZDHHC24	Q6UX98	284 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	DGKH	Q86XP1	1220 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	GBP7	Q8N8V2	638 aa	Predicted RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	SEMA4A	Q9H3S1	761 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	C6orf50	Q9HD87	102 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	ERVK-5	Q9HDB9	667 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	DBR1	Q9UK59	544 aa	Known RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	BZW2	Q9Y6E2	419 aa	Known RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	ZNF804B	A4D1E1	1349 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	RPTOR	Q8N122	1335 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	SLIT2	O94813	1529 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	HGS	O14964	777 aa	Predicted RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	UCHL3	P15374	230 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	ATP4A	P20648	1035 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	RANBP1	P43487	201 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	CD151	P48509	253 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	TMEM266	Q2M3C6	531 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	KIAA1755	Q5JYT7	1200 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	NAF1	Q96HR8	494 aa	Known RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	PLEKHG4B	Q96PX9	1271 aa		13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	BIN2	Q9UBW5	565 aa	Predicted RBP	13.76	□□□□□ -0.21
TRPV1-208	ENST00000574085	LAMB1	P07942	1786 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	NUP98	P52948	1817 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	ZSCAN9	O15535	394 aa	Predicted RBP	13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	FGFR4	P22455	802 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	CTCF	P49711	727 aa	Predicted RBP	13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	MARS	P56192	900 aa	Known RBP	13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	DCAF12L1	Q5VU92	463 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	SUSD4	Q5VX71	490 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	SLC30A9	Q6PML9	568 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	JAML	Q86YT9	394 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	MYLK4	Q86YV6	388 aa	Predicted RBP	13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	MFN1	Q8IWA4	741 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	ZNF34	Q8IZ26	560 aa		13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	RBM46	Q8TBY0	533 aa	Known RBP	13.75	□□□□□ -0.21
TRPV1-208	ENST00000574085	U2AF1L4	Q8WU68	220 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms