RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 C22orf31O95567 290 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
RPA1-206ENST00000573994 KLRC1P26715 233 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 USP11P51784 963 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 NEK4P51957 841 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 PRKCEQ02156 737 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 LETM2Q2VYF4 491 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 GALNT17Q6IS24 598 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 KRT25Q7Z3Z0 450 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 LINC01599Q8WXQ3 324 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 IL17RAQ96F46 866 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 C17orf80Q9BSJ5 609 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 TEKT3Q9BXF9 490 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 DISC1Q9NRI5 854 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 TTC28Q96AY4 2481 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 SIP14410 1827 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 COL1A2P08123 1366 aa11.28□□□□□ -0.6
RPA1-206ENST00000573994 SMIM35A0A1B0GVV1 85 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 ZNF862O60290 1169 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 LPXNO60711 386 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 OATP04181 439 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 XBP1P17861 261 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 CLCN3P51790 818 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 ST3GAL1Q11201 340 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 PAK2Q13177 524 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 TMEM266Q2M3C6 531 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 Q4G0T1 1027 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 ZNF484Q5JVG2 852 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 IER5Q5VY09 327 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 METTL13Q8N6R0 699 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 NSUN7Q8NE18 718 aaKnown RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 ETNPPLQ8TBG4 499 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 TGS1Q96RS0 853 aaKnown RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 RIT2Q99578 217 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 EPAS1Q99814 870 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 COL25A1Q9BXS0 654 aaPredicted RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 INSL6Q9Y581 213 aa11.27□□□□□ -0.61
RPA1-206ENST00000573994 MAFBQ9Y5Q3 323 aaPredicted RBP11.27□□□□□ -0.61
RPA1-206ENST00000573994 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 PSMD10O75832 226 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 VTNP04004 478 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
RPA1-206ENST00000573994 JAK3P52333 1124 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 ERVK-21P61565 698 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 NR5A1Q13285 461 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 KIZQ2M2Z5 673 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 C8orf34Q49A92 452 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 MIER3Q7Z3K6 550 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 KIAA0319LQ8IZA0 1049 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 LRRC71Q8N4P6 559 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 TOP1MTQ969P6 601 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 FAM167AQ96KS9 214 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 MBOAT7Q96N66 472 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 ADAM33Q9BZ11 813 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 CELF4Q9BZC1 486 aaKnown RBP11.26□□□□□ -0.61
RPA1-206ENST00000573994 CDHR5Q9HBB8 845 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 THEGQ9P2T0 379 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 MYO9BQ13459 2157 aa11.26□□□□□ -0.61
RPA1-206ENST00000573994 CYP3A7-CYP3A51PA0A087WV96 503 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 TMEM150BA6NC51 233 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 CCNT1O60563 726 aaKnown RBP11.25□□□□□ -0.61
RPA1-206ENST00000573994 CYP3A7P24462 503 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 SFNP31947 248 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 KRT2P35908 639 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 NEK8Q86SG6 692 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 TMEM40Q8WWA1 233 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 WASF1Q92558 559 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
RPA1-206ENST00000573994 OSMRQ99650 979 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 SUGCTQ9HAC7 445 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 SEPT9Q9UHD8 586 aaPredicted RBP11.25□□□□□ -0.61
RPA1-206ENST00000573994 PADI3Q9ULW8 664 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 AKT3Q9Y243 479 aa11.25□□□□□ -0.61
RPA1-206ENST00000573994 NOC2LQ9Y3T9 749 aaKnown RBP11.25□□□□□ -0.61
RPA1-206ENST00000573994 PRRC2BQ5JSZ5 2229 aaKnown RBP11.24□□□□□ -0.61
RPA1-206ENST00000573994 DPYSL4O14531 572 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 ENPP3O14638 875 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 MGEA5O60502 916 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 CSPG5O95196 566 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 CTNNB1P35222 781 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 TFF2Q03403 129 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 NFX1Q12986 1120 aaKnown RBP11.24□□□□□ -0.61
RPA1-206ENST00000573994 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 NME8Q8N427 588 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 BANK1Q8NDB2 785 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 SH2D3AQ9BRG2 576 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 TMX1Q9H3N1 280 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
RPA1-206ENST00000573994 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms