RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 SPINT1O43278 529 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 PFKMP08237 780 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 ACTN1P12814 892 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 THPOP40225 353 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 KCNJ6P48051 423 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 ADCK5Q3MIX3 580 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 CNKSR3Q6P9H4 555 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 SERINC5Q86VE9 423 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 MICU3Q86XE3 530 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 DBF4BQ8NFT6 615 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 RUFY2Q8WXA3 655 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 GPR20Q99678 358 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 C17orf80Q9BSJ5 609 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 SPZ1Q9BXG8 430 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 MLXIPQ9HAP2 919 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 SERTAD1Q9UHV2 236 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 RALGAPA2Q2PPJ7 1873 aa10.63□□□□□ -0.71
NPLOC4-210ENST00000572824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 ERICH2A1L162 156 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 C17orf102A2RUQ5 167 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 SPATA31C2B4DYI2 1134 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 H3BRB1 525 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 MEN1O00255 615 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 DDAH1O94760 285 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 UPP2O95045 317 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 CSPG5O95196 566 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 ITGB5P18084 799 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 MARK3P27448 753 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 NT5C2P49902 561 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 PDE4CQ08493 712 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 NFXL1Q6ZNB6 911 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 SMARCC2Q8TAQ2 1214 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 CYP2W1Q8TAV3 490 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 LMBR1Q8WVP7 490 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 ATP6V0A1Q93050 837 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 TUT1Q9H6E5 874 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 ANO2Q9NQ90 1003 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 BRPF3Q9ULD4 1205 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
NPLOC4-210ENST00000572824 ST8SIA5O15466 376 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 BAIAP3O94812 1187 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 GJB5O95377 273 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 BMP1P13497 986 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 KCNA2P16389 499 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 ICAM3P32942 547 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 NECTIN1Q15223 517 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 SWI5Q1ZZU3 235 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 WWC2Q6AWC2 1192 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 MYOCDQ8IZQ8 938 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 CCDC155Q8N6L0 562 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 TRAPPC12Q8WVT3 735 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 RRP36Q96EU6 259 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 PCYT2Q99447 389 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 KATNAL1Q9BW62 490 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 SUGCTQ9HAC7 445 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 TMEM260Q9NX78 707 aa10.61□□□□□ -0.71
NPLOC4-210ENST00000572824 TTC3P53804 2025 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 PLXNA4Q9HCM2 1894 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 GSTTP1A0A1W2PQM5 241 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 RSPH10B2B2RC85 870 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 NOP56O00567 594 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 PPFIA4O75335 1185 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 RSPH10BP0C881 870 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 BMP2P12643 396 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 SMTNP53814 917 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 EPHA4P54764 986 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 ADAM17P78536 824 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 MRPS5P82675 430 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 ARHGAP4P98171 946 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 SART3Q15020 963 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 PCNX4Q63HM2 1172 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 CASC1Q6TDU7 716 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 METTL7BQ6UX53 244 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 HEATR3Q7Z4Q2 680 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 PHOSPHO2Q8TCD6 241 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 ATXN2LQ8WWM7 1075 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 LINC01599Q8WXQ3 324 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 INSM2Q96T92 566 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 MAF1Q9H063 256 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 CD320Q9NPF0 282 aa10.6□□□□□ -0.71
NPLOC4-210ENST00000572824 CCDC69A6NI79 296 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 FIBPO43427 364 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 DTNBO60941 627 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 CHRNA1P02708 482 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 GHRP10912 638 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 CDC27P30260 824 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 MCM5P33992 734 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 TCF7P36402 384 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 CENPCQ03188 943 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 PLEKHG4Q58EX7 1191 aa10.59□□□□□ -0.71
NPLOC4-210ENST00000572824 MARCH8Q5T0T0 291 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms