RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 FBXO16Q8IX29 292 aaPredicted RBP22.64■■□□□ 1.21
CHRNE-202ENST00000572438 CPLX3Q8WVH0 158 aa22.64■■□□□ 1.21
CHRNE-202ENST00000572438 PANX2Q96RD6 677 aa22.64■■□□□ 1.21
CHRNE-202ENST00000572438 SEPT9Q9UHD8 586 aaPredicted RBP22.64■■□□□ 1.21
CHRNE-202ENST00000572438 ZMYM2Q9UBW7 1377 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 MANSC4A6NHS7 340 aaPredicted RBP22.63■■□□□ 1.21
CHRNE-202ENST00000572438 TGFB1I1O43294 461 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 RPL13P26373 211 aaKnown RBP22.63■■□□□ 1.21
CHRNE-202ENST00000572438 CASP14P31944 242 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 KCNJ6P48051 423 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 ALCAMQ13740 583 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 FAM102BQ5T8I3 360 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 SAPCD2Q86UD0 394 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 TMEM139Q8IV31 216 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 CNGA4Q8IV77 575 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 ERGIC2Q96RQ1 377 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 MLXIPQ9HAP2 919 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 CYP26B1Q9NR63 512 aa22.63■■□□□ 1.21
CHRNE-202ENST00000572438 K7ENM7 598 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 NR3C1P04150 777 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 NFIL3Q16649 462 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 RGMBQ6NW40 437 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 ARMCX2Q7L311 632 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 SEPT1Q8WYJ6 367 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 BAG1Q99933 345 aaPredicted RBP22.62■■□□□ 1.21
CHRNE-202ENST00000572438 GPRC5CQ9NQ84 441 aa22.62■■□□□ 1.21
CHRNE-202ENST00000572438 DGAT1O75907 488 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 OATP04181 439 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 ATP4AP20648 1035 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 FXR1P51114 621 aaKnown RBP eCLIP22.61■■□□□ 1.21
CHRNE-202ENST00000572438 CELF3Q5SZQ8 465 aaKnown RBP22.61■■□□□ 1.21
CHRNE-202ENST00000572438 CCDC62Q6P9F0 684 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 GPR142Q7Z601 462 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 TRIM59Q8IWR1 403 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 CCDC51Q96ER9 411 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 ST6GALNAC4Q9H4F1 302 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 ZCCHC17Q9NP64 241 aaKnown RBP22.61■■□□□ 1.21
CHRNE-202ENST00000572438 PASKQ96RG2 1323 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 SYCP1Q15431 976 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 FAM160B1Q5W0V3 765 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 ZNF467Q7Z7K2 595 aaPredicted RBP22.61■■□□□ 1.21
CHRNE-202ENST00000572438 KSR1Q8IVT5 923 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 SLC17A8Q8NDX2 589 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 MCPH1Q8NEM0 835 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 AFAP1L1Q8TED9 768 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 KIFAP3Q92845 792 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 PCYT2Q99447 389 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 PDLIM7Q9NR12 457 aa22.61■■□□□ 1.21
CHRNE-202ENST00000572438 STX10O60499 249 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 MAPK4P31152 587 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 GRB14Q14449 540 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 HS2ST1Q7LGA3 356 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 FRMD5Q7Z6J6 570 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 GOLGA5Q8TBA6 731 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 SCFD2Q8WU76 684 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 GBP3Q9H0R5 595 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 KCND1Q9NSA2 647 aa22.6■■□□□ 1.21
CHRNE-202ENST00000572438 IGF2BP3O00425 579 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 SLC16A3O15427 465 aaKnown RBP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 ARHGAP6O43182 974 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 TCF7P36402 384 aaPredicted RBP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 NCKAP1LP55160 1127 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 PEX3P56589 373 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 TTLL4Q14679 1199 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 PLEKHH3Q7Z736 793 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 RETREG2Q8NC44 543 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 NUP58Q9BVL2 599 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 C17orf75Q9HAS0 396 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 ATP6V0A4Q9HBG4 840 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 WDR81Q562E7 1941 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 ZNFX1Q9P2E3 1918 aaKnown RBP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 PLXNB2O15031 1838 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 ADGRA2Q96PE1 1338 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 CLIC2O15247 247 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 TXNP10599 105 aaKnown RBP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 STAT5BP51692 787 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 MTERF2Q49AM1 385 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 GPR20Q99678 358 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 NIFKQ9BYG3 293 aaKnown RBP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 IKZF4Q9H2S9 585 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 TMEM206Q9H813 350 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 FAM184BQ9ULE4 1060 aa22.59■■□□□ 1.21
CHRNE-202ENST00000572438 DIS3Q9Y2L1 958 aaKnown RBP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHRNE-202ENST00000572438 RNF225M0QZC1 329 aaPredicted RBP22.58■■□□□ 1.21
CHRNE-202ENST00000572438 RTP1P59025 263 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 GTF2BQ00403 316 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 DMP1Q13316 513 aaPredicted RBP22.58■■□□□ 1.21
CHRNE-202ENST00000572438 HAUS6Q7Z4H7 955 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 DHX37Q8IY37 1157 aaKnown RBP22.58■■□□□ 1.21
CHRNE-202ENST00000572438 SYCP3Q8IZU3 236 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 ACCSQ96QU6 501 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 NAA15Q9BXJ9 866 aaKnown RBP22.58■■□□□ 1.21
CHRNE-202ENST00000572438 VTA1Q9NP79 307 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 XPNPEP1Q9NQW7 623 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 PDGFCQ9NRA1 345 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 AGPAT3Q9NRZ7 376 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 ARMCX3Q9UH62 379 aaPredicted RBP22.58■■□□□ 1.21
CHRNE-202ENST00000572438 CAPN11Q9UMQ6 739 aa22.58■■□□□ 1.21
CHRNE-202ENST00000572438 TTC26A0AVF1 554 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms