RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TTC38Q5R3I4 469 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 TMEM240Q5SV17 173 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 DGLUCYQ7Z3D6 616 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 BANK1Q8NDB2 785 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 ATP8B4Q8TF62 1192 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 DNAJB3Q8WWF6 145 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 WNT8BQ93098 351 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 FAM49AQ9H0Q0 323 aaPredicted RBP8.74□□□□□ -1.01
SMG6-211ENST00000572369 KCNMB3Q9NPA1 279 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 SEPT9Q9UHD8 586 aaPredicted RBP8.74□□□□□ -1.01
SMG6-211ENST00000572369 CEP131Q9UPN4 1083 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 MAFBQ9Y5Q3 323 aaPredicted RBP8.74□□□□□ -1.01
SMG6-211ENST00000572369 LOXHD1Q8IVV2 1947 aa8.74□□□□□ -1.01
SMG6-211ENST00000572369 COL1A2P08123 1366 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 GPR179Q6PRD1 2367 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 MAST4O15021 2626 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 WDR87Q6ZQQ6 2873 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 PRR23AA6NEV1 266 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 KIF28PB7ZC32 967 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 PROB1E7EW31 1015 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 CAND2O75155 1236 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 OATP04181 439 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 RPLP2P05387 115 aaKnown RBP8.73□□□□□ -1.01
SMG6-211ENST00000572369 HOXC8P31273 242 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 KCNJ6P48051 423 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 PSMC5P62195 406 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 ADAM17P78536 824 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 RBL2Q08999 1139 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 PPP2R5CQ13362 524 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 CUL4AQ13619 759 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 UGCGQ16739 394 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 TMEM266Q2M3C6 531 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 TRIM71Q2Q1W2 868 aaKnown RBP8.73□□□□□ -1.01
SMG6-211ENST00000572369 RASIP1Q5U651 963 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 IER5Q5VY09 327 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 MTHFD1LQ6UB35 978 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 RUFY4Q6ZNE9 571 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 C16orf59Q7L2K0 433 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 METTL13Q8N6R0 699 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 HAS1Q92839 578 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 ATOH1Q92858 354 aaPredicted RBP8.73□□□□□ -1.01
SMG6-211ENST00000572369 CCDC43Q96MW1 224 aaKnown RBP8.73□□□□□ -1.01
SMG6-211ENST00000572369 CTAGE1Q96RT6 745 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 TTC12Q9H892 705 aaPredicted RBP8.73□□□□□ -1.01
SMG6-211ENST00000572369 YBX2Q9Y2T7 364 aaKnown RBP8.73□□□□□ -1.01
SMG6-211ENST00000572369 SLC4A7Q9Y6M7 1214 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 IGSF9BQ9UPX0 1349 aa8.73□□□□□ -1.01
SMG6-211ENST00000572369 GBF1Q92538 1859 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
SMG6-211ENST00000572369 RIF1Q5UIP0 2472 aaKnown RBP8.72□□□□□ -1.01
SMG6-211ENST00000572369 SMIM35A0A1B0GVV1 85 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 EML1O00423 815 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 P4HBP07237 508 aaKnown RBP8.72□□□□□ -1.01
SMG6-211ENST00000572369 OR52Z1P0C646 297 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 ATP4AP20648 1035 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 U2AF2P26368 475 aaKnown RBP eCLIP8.72□□□□□ -1.012e-8■■■□□ 17.8
SMG6-211ENST00000572369 TMOD1P28289 359 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 QARSP47897 775 aaKnown RBP8.72□□□□□ -1.01
SMG6-211ENST00000572369 TRAPPC10P48553 1259 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 CYP4A11Q02928 519 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 TBC1D8BQ0IIM8 1120 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 TMEM62Q0P6H9 643 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 ORC2Q13416 577 aaPredicted RBP8.72□□□□□ -1.01
SMG6-211ENST00000572369 IKBKEQ14164 716 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 EPHA7Q15375 998 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 MTERF2Q49AM1 385 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 RILPL1Q5EBL4 403 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 XKR3Q5GH77 459 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 MARCH8Q5T0T0 291 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 CNKSR3Q6P9H4 555 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 TPH2Q8IWU9 490 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 ZBTB10Q96DT7 871 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 DYDC2Q96IM9 177 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 SCLT1Q96NL6 688 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 MAP7D2Q96T17 732 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 IRF2BPLQ9H1B7 796 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 SUGCTQ9HAC7 445 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 VAV3Q9UKW4 847 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 AKT3Q9Y243 479 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 GINS2Q9Y248 185 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 PCDHA2Q9Y5H9 948 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 CDY2AQ9Y6F7 541 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 GVINP1Q7Z2Y8 2422 aa8.72□□□□□ -1.01
SMG6-211ENST00000572369 VPS13AQ96RL7 3174 aa8.71□□□□□ -1.01
SMG6-211ENST00000572369 CACNA1HO95180 2353 aa8.71□□□□□ -1.01
SMG6-211ENST00000572369 SIP14410 1827 aa8.71□□□□□ -1.01
SMG6-211ENST00000572369 ARID2Q68CP9 1835 aa8.71□□□□□ -1.01
SMG6-211ENST00000572369 MAP1BP46821 2468 aaKnown RBP8.71□□□□□ -1.01
SMG6-211ENST00000572369 MBLAC1A4D2B0 266 aaPredicted RBP8.71□□□□□ -1.02
SMG6-211ENST00000572369 WNT7AO00755 349 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 MAGEB2O15479 319 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 ZNF862O60290 1169 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 NBNO60934 754 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 BAIAP3O94812 1187 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 TECP42680 631 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 DNM2P50570 870 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 MRPS6P82932 125 aaKnown RBP8.71□□□□□ -1.02
SMG6-211ENST00000572369 CTTNQ14247 550 aaKnown RBP8.71□□□□□ -1.02
SMG6-211ENST00000572369 NBR1Q14596 966 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms