RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 RARAP10276 462 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 KCNJ2P63252 427 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 C12orf60Q5U649 245 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 USP17L1Q7RTZ2 530 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 ZC3H3Q8IXZ2 948 aaKnown RBP16.71■□□□□ 0.27
SMG6-207ENST00000570756 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 FAM84BQ96KN1 310 aaPredicted RBP16.71■□□□□ 0.27
SMG6-207ENST00000570756 ZNF570Q96NI8 536 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 ANKRD27Q96NW4 1050 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 SH3GL3Q99963 347 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 TMEM47Q9BQJ4 181 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 TMEM109Q9BVC6 243 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
SMG6-207ENST00000570756 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
SMG6-207ENST00000570756 NENFQ9UMX5 172 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 BRWD3Q6RI45 1802 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 SMNDC1O75940 238 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMG6-207ENST00000570756 GOLGA8HP0CJ92 632 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 LACTBP83111 547 aaPredicted RBP16.71■□□□□ 0.27
SMG6-207ENST00000570756 KLRC3Q07444 240 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 KCNK18Q7Z418 384 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
SMG6-207ENST00000570756 MICAL1Q8TDZ2 1067 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 KLHL29Q96CT2 875 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 SLC5A4Q9NY91 659 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 HDAC9Q9UKV0 1011 aa16.71■□□□□ 0.27
SMG6-207ENST00000570756 ITGB4P16144 1822 aa16.71■□□□□ 0.26
SMG6-207ENST00000570756 LAMB2P55268 1798 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMG6-207ENST00000570756 ACTN1P12814 892 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 PLTPP55058 493 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 COPS2P61201 443 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 ATP11AP98196 1134 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 EXOC3L4Q17RC7 722 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 KIAA1755Q5JYT7 1200 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 CARD9Q9H257 536 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 MTRF1LQ9UGC7 380 aaKnown RBP16.7■□□□□ 0.26
SMG6-207ENST00000570756 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 SMIM23A6NLE4 172 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 OAS1P00973 400 aaKnown RBP16.7■□□□□ 0.26
SMG6-207ENST00000570756 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
SMG6-207ENST00000570756 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
SMG6-207ENST00000570756 SF3A3Q12874 501 aaKnown RBP eCLIP16.7■□□□□ 0.26
SMG6-207ENST00000570756 SLC29A2Q14542 456 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 SLC4A8Q2Y0W8 1093 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 MIS18BP1Q6P0N0 1132 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 FRMD5Q7Z6J6 570 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 DYDC1Q8WWB3 177 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 RNF25Q96BH1 459 aaPredicted RBP16.7■□□□□ 0.26
SMG6-207ENST00000570756 NT5C3AQ9H0P0 336 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 TBC1D7Q9P0N9 293 aa16.7■□□□□ 0.26
SMG6-207ENST00000570756 hCG_1984214I3L0E3 225 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 O00370 1275 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 SLC37A4O43826 429 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
SMG6-207ENST00000570756 GFPT2O94808 682 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 ATP2A2P16615 1042 aaKnown RBP16.69■□□□□ 0.26
SMG6-207ENST00000570756 SLC9A1P19634 815 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 SMARCA1P28370 1054 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 RXRBP28702 533 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 IFNAR2P48551 515 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
SMG6-207ENST00000570756 ZNF713Q8N859 430 aaPredicted RBP16.69■□□□□ 0.26
SMG6-207ENST00000570756 NUDT12Q9BQG2 462 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 EMILIN3Q9NT22 766 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMG6-207ENST00000570756 ARMCX3Q9UH62 379 aaPredicted RBP16.69■□□□□ 0.26
SMG6-207ENST00000570756 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 KDM3AQ9Y4C1 1321 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 NR2F2P24468 414 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 MAP2K1Q02750 393 aaPredicted RBP16.69■□□□□ 0.26
SMG6-207ENST00000570756 BNIP1Q12981 228 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 CNGA2Q16280 664 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 JAMLQ86YT9 394 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 CD2APQ9Y5K6 639 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
SMG6-207ENST00000570756 TDP2O95551 362 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 PON1P27169 355 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 CCNG1P51959 295 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 MAPK7Q13164 816 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 HERC4Q5GLZ8 1057 aaPredicted RBP16.68■□□□□ 0.26
SMG6-207ENST00000570756 DYNLL2Q96FJ2 89 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 ARHGEF3Q9NR81 526 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 TMEM260Q9NX78 707 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 PCDHA2Q9Y5H9 948 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 MAST2Q6P0Q8 1798 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 KIAA0391O15091 583 aaKnown RBP16.68■□□□□ 0.26
SMG6-207ENST00000570756 NTSR2O95665 410 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 XRCC5P13010 732 aaKnown RBP16.68■□□□□ 0.26
SMG6-207ENST00000570756 FERP16591 822 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 PEX19P40855 299 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 MSH2P43246 934 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 BLMHQ13867 455 aa16.68■□□□□ 0.26
SMG6-207ENST00000570756 AP1ARQ63HQ0 302 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms