RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 UBE3AQ05086 875 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 TBC1D8BQ0IIM8 1120 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 TMEM62Q0P6H9 643 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 SCRN1Q12765 414 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 NFX1Q12986 1120 aaKnown RBP10.92□□□□□ -0.66
TRIM25-204ENST00000570749 COL19A1Q14993 1142 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 LEXMQ3ZCV2 418 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 XKR3Q5GH77 459 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 MIER3Q7Z3K6 550 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 SPRED2Q7Z698 418 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 NEK8Q86SG6 692 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 METTL13Q8N6R0 699 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 LINC01599Q8WXQ3 324 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 PABPC5Q96DU9 382 aaKnown RBP10.92□□□□□ -0.66
TRIM25-204ENST00000570749 DDX25Q9UHL0 483 aaKnown RBP10.92□□□□□ -0.66
TRIM25-204ENST00000570749 PCDHB7Q9Y5E2 793 aa10.92□□□□□ -0.66
TRIM25-204ENST00000570749 GAS2O43903 313 aaKnown RBP10.91□□□□□ -0.66
TRIM25-204ENST00000570749 GPR32O75388 356 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 ZSCAN20P17040 1043 aaPredicted RBP10.91□□□□□ -0.66
TRIM25-204ENST00000570749 EIF4BP23588 611 aaKnown RBP10.91□□□□□ -0.66
TRIM25-204ENST00000570749 TFF2Q03403 129 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 STK3Q13188 491 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 NPY5RQ15761 445 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 KRT40Q6A162 431 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 EFCAB12Q6NXP0 572 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 B3GNT9Q6UX72 402 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 SLFN12Q8IYM2 578 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 LINC01465Q8N7H1 131 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 ETNPPLQ8TBG4 499 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 NIFKQ9BYG3 293 aaKnown RBP10.91□□□□□ -0.66
TRIM25-204ENST00000570749 INO80BQ9C086 356 aaPredicted RBP10.91□□□□□ -0.66
TRIM25-204ENST00000570749 UNC45AQ9H3U1 944 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 TMEM161AQ9NX61 479 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 DACT1Q9NYF0 836 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 ST3GAL5Q9UNP4 418 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 AKT3Q9Y243 479 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 GINS2Q9Y248 185 aa10.91□□□□□ -0.66
TRIM25-204ENST00000570749 C9IYK1 514 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 CHMP2AO43633 222 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 ZNF862O60290 1169 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 BAG4O95429 457 aaKnown RBP10.9□□□□□ -0.66
TRIM25-204ENST00000570749 LINC00271P0C7V0 271 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 KCNQ1P51787 676 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 PSMC5P62195 406 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 PPP2R5CQ13362 524 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 TARBP2Q15633 366 aaKnown RBP10.9□□□□□ -0.66
TRIM25-204ENST00000570749 KIZQ2M2Z5 673 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 PDE12Q6L8Q7 609 aaKnown RBP10.9□□□□□ -0.66
TRIM25-204ENST00000570749 RTN4RL1Q86UN2 441 aaPredicted RBP10.9□□□□□ -0.66
TRIM25-204ENST00000570749 ZNF410Q86VK4 478 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 NEK9Q8TD19 979 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 OSMRQ99650 979 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 ADAM2Q99965 735 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 C1QTNF1Q9BXJ1 281 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 TMX1Q9H3N1 280 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 ATP6V0A4Q9HBG4 840 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 ORC3Q9UBD5 711 aaPredicted RBP10.9□□□□□ -0.66
TRIM25-204ENST00000570749 TPCN1Q9ULQ1 816 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 NOC2LQ9Y3T9 749 aaKnown RBP10.9□□□□□ -0.66
TRIM25-204ENST00000570749 PCDHB12Q9Y5F1 795 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 ARID2Q68CP9 1835 aa10.9□□□□□ -0.66
TRIM25-204ENST00000570749 PLXNA4Q9HCM2 1894 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 IGKV6-21A0A0C4DH24 114 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 ADAMTS3O15072 1205 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 EDIL3O43854 480 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 TDP2O95551 362 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 VTNP04004 478 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 SKIP12755 728 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 LAG3P18627 525 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 SFPQP23246 707 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 PPM1AP35813 382 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 KRT2P35908 639 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 QARSP47897 775 aaKnown RBP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 GPC3P51654 580 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 CLCN3P51790 818 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 AK2P54819 239 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 NLRP11P59045 1033 aaKnown RBP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 FAM189BP81408 668 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 TRIM29Q14134 588 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 INF2Q27J81 1249 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 LETM2Q2VYF4 491 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 TCEAL5Q5H9L2 206 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 TMEM40Q8WWA1 233 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 GTF3C6Q969F1 213 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 ZBTB10Q96DT7 871 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 SCLT1Q96NL6 688 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 GCOM2Q9BZD3 368 aaPredicted RBP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 KCNMB3Q9NPA1 279 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 CHST12Q9NRB3 414 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 PRKAG3Q9UGI9 489 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 SEPT9Q9UHD8 586 aaPredicted RBP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
TRIM25-204ENST00000570749 MRPL42Q9Y6G3 142 aaKnown RBP10.89□□□□□ -0.67
TRIM25-204ENST00000570749 MARCH6O60337 910 aa10.88□□□□□ -0.67
TRIM25-204ENST00000570749 CCNT1O60563 726 aaKnown RBP10.88□□□□□ -0.67
TRIM25-204ENST00000570749 PPFIA3O75145 1194 aa10.88□□□□□ -0.67
TRIM25-204ENST00000570749 EOMESO95936 686 aa10.88□□□□□ -0.67
TRIM25-204ENST00000570749 P4HBP07237 508 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms