RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 NFIXQ14938 502 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 DPY19L1Q2PZI1 675 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ALFQ53S48 1182 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 FAM47CQ5HY64 1035 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 IFIT1BQ5T764 474 aaKnown RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 LETMD1Q6P1Q0 360 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ARMCX6Q7L4S7 300 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SRGAP1Q7Z6B7 1085 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 CATIPQ7Z7H3 387 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SRLQ86TD4 932 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 RASSF3Q86WH2 238 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ZNF354CQ86Y25 554 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 DNAJC10Q8IXB1 793 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 AMOTL1Q8IY63 956 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SMYD4Q8IYR2 804 aaPredicted RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 TTLL6Q8N841 843 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 TEX19Q8NA77 164 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 PARD3BQ8TEW8 1205 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 LMBR1Q8WVP7 490 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 TAAR9Q96RI9 348 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 MYD88Q99836 296 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ALG1Q9BT22 464 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 DSCC1Q9BVC3 393 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 RNF38Q9H0F5 515 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SUGCTQ9HAC7 445 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 PIDD1Q9HB75 910 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 SSU72Q9NP77 194 aaKnown RBP3.88□□□□□ -1.79
CNOT1-221ENST00000569924 OXSMQ9NWU1 459 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 GFOD1Q9NXC2 390 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 KCNK4Q9NYG8 393 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 GTF2IRD1Q9UHL9 959 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 GGA1Q9UJY5 639 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 PCOLCE2Q9UKZ9 415 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 GTF2A1LQ9UNN4 478 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 AP4E1Q9UPM8 1137 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 DNM3Q9UQ16 869 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 DMTF1Q9Y222 760 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 INVSQ9Y283 1065 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 KNSTRNQ9Y448 316 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 IPPQ9Y573 584 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 ST14Q9Y5Y6 855 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 UBR2Q8IWV8 1755 aa3.88□□□□□ -1.79
CNOT1-221ENST00000569924 TIAM2Q8IVF5 1701 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 VIRMAQ69YN4 1812 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ABHD14A-ACY1A0A1B0GW23 586 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 CCDC66A2RUB6 948 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 C2orf71A6NGG8 1288 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 H0YIN7 160 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ARNTLO00327 626 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 MSCO60682 206 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 PPFIA3O75145 1194 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 STARD3NLO95772 234 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ZBED1O96006 694 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 HRGP04196 525 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SERPINB2P05120 415 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 HSP90AA1P07900 732 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 HSPA5P11021 654 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ADH5P11766 374 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 GRK2P25098 689 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 GPR3P46089 330 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SARSP49591 514 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ALDH5A1P51649 535 aaPredicted RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 EIF5P55010 431 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 PHC1P78364 1004 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 RASSF7Q02833 373 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SOX4Q06945 474 aaPredicted RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SNW1Q13573 536 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SLC9A5Q14940 896 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 TERF2Q15554 542 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 DUOXA2Q1HG44 320 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 PKDCCQ504Y2 493 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 E4F1Q66K89 784 aaPredicted RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 CREB3L3Q68CJ9 461 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 KRBA2Q6ZNG9 492 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 C16orf59Q7L2K0 433 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 OTOP1Q7RTM1 612 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 CDH24Q86UP0 819 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 C2CD5Q86YS7 1000 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 CMIPQ8IY22 773 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 STK11IPQ8N1F8 1099 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 TMTC2Q8N394 836 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 GOLGA6L1Q8N7Z2 621 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 C2orf69Q8N8R5 385 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SMG8Q8ND04 991 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ACRBPQ8NEB7 543 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 UBASH3BQ8TF42 649 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 ATXN2LQ8WWM7 1075 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 FBXW5Q969U6 566 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 KIFC2Q96AC6 838 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 TRMT2BQ96GJ1 504 aaKnown RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 TEKT5Q96M29 485 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SCLT1Q96NL6 688 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 BRIP1Q9BX63 1249 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 LGR6Q9HBX8 967 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 SENP2Q9HC62 589 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 CYP4F12Q9HCS2 524 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 GPRC5CQ9NQ84 441 aa3.87□□□□□ -1.79
CNOT1-221ENST00000569924 H2AFY2Q9P0M6 372 aaPredicted RBP3.87□□□□□ -1.79
CNOT1-221ENST00000569924 TMEFF2Q9UIK5 374 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms