RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RGS18Q9NS28 235 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 RNF19AQ9NV58 838 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 IGLV3-22A0A075B6J6 115 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 HIDE1A8MVS5 230 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 ZBTB43O43298 467 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 PDGFBP01127 241 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-220ENST00000569827 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
CAPN3-220ENST00000569827 CPA1P15085 419 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 FGFR4P22455 802 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 TECP42680 631 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
CAPN3-220ENST00000569827 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 LRRC55Q6ZSA7 311 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 NME8Q8N427 588 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 LRRC71Q8N4P6 559 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 RNF169Q8NCN4 708 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 PHF7Q9BWX1 381 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-220ENST00000569827 ENTPD7Q9NQZ7 604 aa13.72□□□□□ -0.21
CAPN3-220ENST00000569827 FAM217BQ9NTX9 383 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-220ENST00000569827 PTPRZ1P23471 2315 aaPredicted RBP13.72□□□□□ -0.21
CAPN3-220ENST00000569827 DMDP11532 3685 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 COL1A2P08123 1366 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 KLF18A0A0U1RQI7 1052 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 FSCN2O14926 492 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 GPR32O75388 356 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 TCF15Q12870 199 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
CAPN3-220ENST00000569827 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 MIS18BP1Q6P0N0 1132 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 SLC24A5Q71RS6 500 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 SUGP1Q8IWZ8 645 aaKnown RBP13.71□□□□□ -0.21
CAPN3-220ENST00000569827 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 SUSD6Q92537 303 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 TNPO1Q92973 898 aaKnown RBP13.71□□□□□ -0.21
CAPN3-220ENST00000569827 NEK1Q96PY6 1258 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 TCF25Q9BQ70 676 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 ATP6V0A4Q9HBG4 840 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 TSHZ2Q9NRE2 1034 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.21
CAPN3-220ENST00000569827 BARHL2Q9NY43 387 aa13.71□□□□□ -0.21
CAPN3-220ENST00000569827 RIF1Q5UIP0 2472 aaKnown RBP13.71□□□□□ -0.21
CAPN3-220ENST00000569827 ARID2Q68CP9 1835 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 IPO5O00410 1097 aaKnown RBP13.7□□□□□ -0.22
CAPN3-220ENST00000569827 GPR182O15218 404 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 FOSP01100 380 aaPredicted RBP13.7□□□□□ -0.22
CAPN3-220ENST00000569827 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 CA8P35219 290 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 DSC3Q14574 896 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 ZNF484Q5JVG2 852 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 FBXL6Q8N531 539 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 GJA10Q969M2 543 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 CASD1Q96PB1 797 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 ZNF577Q9BSK1 485 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 KCNH6Q9H252 994 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 AAASQ9NRG9 546 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 C1orf112Q9NSG2 853 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 GABBR1Q9UBS5 961 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
CAPN3-220ENST00000569827 FAM186AA6NE01 2351 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 DOCK6Q96HP0 2047 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 TDRD15B5MCY1 1934 aaKnown RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 CSDE1O75534 798 aaKnown RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 SLC26A2P50443 739 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 CRYBB1P53674 252 aaPredicted RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 EXOSC10Q01780 885 aaKnown RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 UBE3AQ05086 875 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 UGCGQ16739 394 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 LONRF3Q496Y0 759 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 PRR16Q569H4 304 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 CLLU1OSQ5K130 101 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 ANKRD54Q6NXT1 300 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 BMP8AQ7Z5Y6 402 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 CRYGNQ8WXF5 182 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
CAPN3-220ENST00000569827 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 S1PR5Q9H228 398 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
CAPN3-220ENST00000569827 CHMP2AO43633 222 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 LAG3P18627 525 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 PTPN5P54829 565 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 SIGLEC14Q08ET2 396 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 KCNC3Q14003 757 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 EFCAB12Q6NXP0 572 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 KCNT2Q6UVM3 1135 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 NIPA1Q7RTP0 329 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 ZBTB33Q86T24 672 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
CAPN3-220ENST00000569827 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 TCEAL9Q9UHQ7 104 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
CAPN3-220ENST00000569827 MAFBQ9Y5Q3 323 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms